RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ABHD15Q6UXT9 468 aa18.59■□□□□ 0.57
RNF43-206ENST00000582293 VTI1AQ96AJ9 217 aa18.59■□□□□ 0.57
RNF43-206ENST00000582293 CTAGE1Q96RT6 745 aa18.59■□□□□ 0.57
RNF43-206ENST00000582293 TBC1D22BQ9NU19 505 aa18.59■□□□□ 0.57
RNF43-206ENST00000582293 EVI5O60447 810 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 PQBP1O60828 265 aaKnown RBP18.58■□□□□ 0.56
RNF43-206ENST00000582293 SYT1P21579 422 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 FAAP100Q0VG06 881 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 NBR1Q14596 966 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 MFSD10Q14728 455 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 UTP14CQ5TAP6 766 aaKnown RBP18.58■□□□□ 0.56
RNF43-206ENST00000582293 SH3RF1Q7Z6J0 888 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 TOX2Q96NM4 488 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 RIT2Q99578 217 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 TMEM60Q9H2L4 133 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 UNC45AQ9H3U1 944 aa18.58■□□□□ 0.56
RNF43-206ENST00000582293 EMSYQ7Z589 1322 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 H3BRB1 525 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 B4GALT4O60513 344 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 KIAA0753Q2KHM9 967 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 ZNF746Q6NUN9 644 aaPredicted RBP18.57■□□□□ 0.56
RNF43-206ENST00000582293 NFRKBQ6P4R8 1299 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 SESTD1Q86VW0 696 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 NAP1L4Q99733 375 aaKnown RBP18.57■□□□□ 0.56
RNF43-206ENST00000582293 TRPV6Q9H1D0 765 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 RNPEPQ9H4A4 650 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 TUT1Q9H6E5 874 aaKnown RBP18.57■□□□□ 0.56
RNF43-206ENST00000582293 PDLIM7Q9NR12 457 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 HDAC6Q9UBN7 1215 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 VAV3Q9UKW4 847 aa18.57■□□□□ 0.56
RNF43-206ENST00000582293 LTBP2Q14767 1821 aa18.56■□□□□ 0.56
RNF43-206ENST00000582293 TRIM43BA6NCK2 446 aa18.56■□□□□ 0.56
RNF43-206ENST00000582293 H3BQV1 296 aa18.56■□□□□ 0.56
RNF43-206ENST00000582293 SUPT20HL2P0C7V6 817 aa18.56■□□□□ 0.56
RNF43-206ENST00000582293 ATP2B1P20020 1258 aa18.56■□□□□ 0.56
RNF43-206ENST00000582293 HOXC8P31273 242 aa18.56■□□□□ 0.56
RNF43-206ENST00000582293 KRT76Q01546 638 aa18.56■□□□□ 0.56
RNF43-206ENST00000582293 LRCH2Q5VUJ6 765 aa18.56■□□□□ 0.56
RNF43-206ENST00000582293 CCDC60Q8IWA6 550 aaPredicted RBP18.56■□□□□ 0.56
RNF43-206ENST00000582293 TRIM43Q96BQ3 446 aaPredicted RBP18.56■□□□□ 0.56
RNF43-206ENST00000582293 MTMR9Q96QG7 549 aa18.56■□□□□ 0.56
RNF43-206ENST00000582293 TRMT13Q9NUP7 481 aaKnown RBP18.56■□□□□ 0.56
RNF43-206ENST00000582293 H0YGN5 161 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 TBX3O15119 743 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 GAS7O60861 476 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 ATP4AP20648 1035 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 ITGB8P26012 769 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 SPIRE1Q08AE8 756 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 ZNF174Q15697 407 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 TTC38Q5R3I4 469 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 MCTP1Q6DN14 999 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 GDF6Q6KF10 455 aaPredicted RBP18.55■□□□□ 0.56
RNF43-206ENST00000582293 C4orf32Q8N8J7 132 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 FAM20AQ96MK3 541 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 KATNAL1Q9BW62 490 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 TEKT3Q9BXF9 490 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 SEZ6LQ9BYH1 1024 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 GTF2IRD1Q9UHL9 959 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 TBX21Q9UL17 535 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 ZMYND8Q9ULU4 1186 aaPredicted RBP18.55■□□□□ 0.56
RNF43-206ENST00000582293 MTMR6Q9Y217 621 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 PCDHB6Q9Y5E3 794 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 WDR81Q562E7 1941 aa18.55■□□□□ 0.56
RNF43-206ENST00000582293 EML1O00423 815 aa18.54■□□□□ 0.56
RNF43-206ENST00000582293 NEMFO60524 1076 aa18.54■□□□□ 0.56
RNF43-206ENST00000582293 CLTBP09497 229 aa18.54■□□□□ 0.56
RNF43-206ENST00000582293 SYN1P17600 705 aa18.54■□□□□ 0.56
RNF43-206ENST00000582293 MCM7P33993 719 aa18.54■□□□□ 0.56
RNF43-206ENST00000582293 TRAPPC10P48553 1259 aa18.54■□□□□ 0.56
RNF43-206ENST00000582293 ZNF200P98182 395 aaPredicted RBP18.54■□□□□ 0.56
RNF43-206ENST00000582293 PTPN11Q06124 597 aaPredicted RBP18.54■□□□□ 0.56
RNF43-206ENST00000582293 GNL2Q13823 731 aaKnown RBP18.54■□□□□ 0.56
RNF43-206ENST00000582293 AFAP1L1Q8TED9 768 aa18.54■□□□□ 0.56
RNF43-206ENST00000582293 MROH7Q68CQ1 1323 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 VPS37CA5D8V6 355 aaPredicted RBP18.53■□□□□ 0.56
RNF43-206ENST00000582293 CHMP2AO43633 222 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 SMIM10L2AP0DMW4 78 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 SMIM10L2BP0DMW5 78 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 PDCP20941 246 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 MARK3P27448 753 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 ADAM17P78536 824 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 RESTQ13127 1097 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 PPP2R5CQ13362 524 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 UGCGQ16739 394 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 FAM47CQ5HY64 1035 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 SWSAP1Q6NVH7 229 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 PLPPR4Q7Z2D5 763 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 FERMT3Q86UX7 667 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 SMAP1Q8IYB5 467 aaPredicted RBP18.53■□□□□ 0.56
RNF43-206ENST00000582293 SPRYD3Q8NCJ5 442 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 SMARCAD1Q9H4L7 1026 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 DISC1Q9NRI5 854 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 PCDHA10Q9Y5I2 948 aa18.53■□□□□ 0.56
RNF43-206ENST00000582293 MAFBQ9Y5Q3 323 aaPredicted RBP18.53■□□□□ 0.56
RNF43-206ENST00000582293 PDE4DIPQ5VU43 2346 aa18.52■□□□□ 0.56
RNF43-206ENST00000582293 IGSF9BQ9UPX0 1349 aa18.52■□□□□ 0.56
RNF43-206ENST00000582293 DCDC2CA8MYV0 355 aa18.52■□□□□ 0.56
RNF43-206ENST00000582293 WDR64B1ANS9 1081 aa18.52■□□□□ 0.56
RNF43-206ENST00000582293 RBAK-RBAKDNI3L0D1 243 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms