RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 NFRKBQ6P4R8 1299 aa23.48■■□□□ 1.35
PPP4R1-221ENST00000582240 PCYT2Q99447 389 aa23.48■■□□□ 1.35
PPP4R1-221ENST00000582240 GDF15Q99988 308 aa23.48■■□□□ 1.35
PPP4R1-221ENST00000582240 TUT1Q9H6E5 874 aaKnown RBP23.48■■□□□ 1.35
PPP4R1-221ENST00000582240 BRMS1Q9HCU9 246 aa23.48■■□□□ 1.35
PPP4R1-221ENST00000582240 UMODL1Q5DID0 1318 aa23.48■■□□□ 1.35
PPP4R1-221ENST00000582240 C7orf31Q8N865 590 aa23.47■■□□□ 1.35
PPP4R1-221ENST00000582240 LBHD1Q9BQE6 289 aaPredicted RBP23.47■■□□□ 1.35
PPP4R1-221ENST00000582240 MARK3P27448 753 aa23.46■■□□□ 1.35
PPP4R1-221ENST00000582240 CYP2C18P33260 490 aa23.46■■□□□ 1.35
PPP4R1-221ENST00000582240 SETQ01105 290 aaPredicted RBP23.46■■□□□ 1.35
PPP4R1-221ENST00000582240 DNAH12Q6ZR08 3092 aa23.46■■□□□ 1.35
PPP4R1-221ENST00000582240 NEK8Q86SG6 692 aa23.46■■□□□ 1.35
PPP4R1-221ENST00000582240 KATNAL1Q9BW62 490 aa23.46■■□□□ 1.35
PPP4R1-221ENST00000582240 SCN10AQ9Y5Y9 1956 aa23.46■■□□□ 1.35
PPP4R1-221ENST00000582240 CYP3A7-CYP3A51PA0A087WV96 503 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 WNT7AO00755 349 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 SLC37A4O43826 429 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 CYP3A7P24462 503 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 GJB2P29033 226 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 PTGISQ16647 500 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 Q4G0T1 1027 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 GLG1Q92896 1179 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 SEZ6LQ9BYH1 1024 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 RNPEPQ9H4A4 650 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 GTF2IRD1Q9UHL9 959 aa23.45■■□□□ 1.34
PPP4R1-221ENST00000582240 CCNT1O60563 726 aaKnown RBP23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 TIMP1P01033 207 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 SMIM10L2AP0DMW4 78 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 SMIM10L2BP0DMW5 78 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 ATP2B1P20020 1258 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 CCL23P55773 120 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 PTPN11Q06124 597 aaPredicted RBP23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 IL27Q8NEV9 243 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 FBXO18Q8NFZ0 1043 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 MBOAT7Q96N66 472 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 CTAGE1Q96RT6 745 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 UBE2OQ9C0C9 1292 aaKnown RBP23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 DDX25Q9UHL0 483 aaKnown RBP23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 NOD1Q9Y239 953 aa23.44■■□□□ 1.34
PPP4R1-221ENST00000582240 EPHB4P54760 987 aa23.43■■□□□ 1.34
PPP4R1-221ENST00000582240 SAFBQ15424 915 aaKnown RBP eCLIP23.43■■□□□ 1.34
PPP4R1-221ENST00000582240 SLC5A5Q92911 643 aa23.43■■□□□ 1.34
PPP4R1-221ENST00000582240 NOC4LQ9BVI4 516 aaKnown RBP23.43■■□□□ 1.34
PPP4R1-221ENST00000582240 PRO3102Q9H379 93 aa23.43■■□□□ 1.34
PPP4R1-221ENST00000582240 HIPK3Q9H422 1215 aa23.43■■□□□ 1.34
PPP4R1-221ENST00000582240 TBC1D22BQ9NU19 505 aa23.43■■□□□ 1.34
PPP4R1-221ENST00000582240 SETD4Q9NVD3 440 aa23.43■■□□□ 1.34
PPP4R1-221ENST00000582240 SMC3Q9UQE7 1217 aa23.43■■□□□ 1.34
PPP4R1-221ENST00000582240 KIF28PB7ZC32 967 aa23.42■■□□□ 1.34
PPP4R1-221ENST00000582240 CHMP2AO43633 222 aa23.42■■□□□ 1.34
PPP4R1-221ENST00000582240 LGR5O75473 907 aa23.42■■□□□ 1.34
PPP4R1-221ENST00000582240 ATG7O95352 703 aa23.42■■□□□ 1.34
PPP4R1-221ENST00000582240 SUPT20HL2P0C7V6 817 aa23.42■■□□□ 1.34
PPP4R1-221ENST00000582240 ABHD15Q6UXT9 468 aa23.42■■□□□ 1.34
PPP4R1-221ENST00000582240 SESTD1Q86VW0 696 aa23.42■■□□□ 1.34
PPP4R1-221ENST00000582240 FOXD4L1Q9NU39 408 aa23.42■■□□□ 1.34
PPP4R1-221ENST00000582240 ZNF215Q9UL58 517 aaPredicted RBP23.42■■□□□ 1.34
PPP4R1-221ENST00000582240 C17orf102A2RUQ5 167 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 BACH1O14867 736 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 GAS7O60861 476 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 LRCH2Q5VUJ6 765 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 SWSAP1Q6NVH7 229 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 MOXD1Q6UVY6 613 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 DHX38Q92620 1227 aaKnown RBP23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 WNT8BQ93098 351 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 SCLYQ96I15 445 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 UNC45AQ9H3U1 944 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 SMARCAD1Q9H4L7 1026 aa23.41■■□□□ 1.34
PPP4R1-221ENST00000582240 CEP290O15078 2479 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 STAT5BP51692 787 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 CUL4AQ13619 759 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 MFSD5Q6N075 450 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 TRMT1LQ7Z2T5 733 aaKnown RBP23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 POTEDQ86YR6 584 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 CCDC60Q8IWA6 550 aaPredicted RBP23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 ETNPPLQ8TBG4 499 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 ZBTB10Q96DT7 871 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 TEKT3Q9BXF9 490 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 WNT8AQ9H1J5 351 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 AZI2Q9H6S1 392 aa23.4■■□□□ 1.34
PPP4R1-221ENST00000582240 TREHO43280 583 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 PSMD10O75832 226 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 ACRP10323 421 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 CSF2RAP15509 400 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 IGBP1P78318 339 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 GNL2Q13823 731 aaKnown RBP23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 PLCB4Q15147 1175 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 PPP4R3AQ6IN85 833 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 ZNF746Q6NUN9 644 aaPredicted RBP23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 MIS18BP1Q6P0N0 1132 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 ATP6V0A1Q93050 837 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 ERAP1Q9NZ08 941 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 SAMM50Q9Y512 469 aa23.39■■□□□ 1.33
PPP4R1-221ENST00000582240 EMSYQ7Z589 1322 aa23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 BMP8BP34820 402 aa23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 KRT76Q01546 638 aa23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 FPGSQ05932 587 aa23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 C9orf50Q5SZB4 431 aa23.38■■□□□ 1.33
PPP4R1-221ENST00000582240 HAS1Q92839 578 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms