RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 FAM47CQ5HY64 1035 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 FAM160B1Q5W0V3 765 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 MIS18BP1Q6P0N0 1132 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 HSCBQ8IWL3 235 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 FAM126BQ8IXS8 530 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 SLFN12Q8IYM2 578 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 TDHQ8IZJ6 230 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 CCDC155Q8N6L0 562 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 CYP2W1Q8TAV3 490 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 ZFP91Q96JP5 570 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-212ENST00000582122 MBOAT7Q96N66 472 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 TUT1Q9H6E5 874 aaKnown RBP11.8□□□□□ -0.52
TOP3A-212ENST00000582122 TMEM39AQ9NV64 488 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 ERAP1Q9NZ08 941 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 DDX25Q9UHL0 483 aaKnown RBP11.8□□□□□ -0.52
TOP3A-212ENST00000582122 ZMYND8Q9ULU4 1186 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-212ENST00000582122 NOL7Q9UMY1 257 aaKnown RBP11.8□□□□□ -0.52
TOP3A-212ENST00000582122 NOD1Q9Y239 953 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 EMSYQ7Z589 1322 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 BTBD18B2RXH4 712 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 H3BQV1 296 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 HAS3O00219 553 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 KIAA0355O15063 1070 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 MARCH6O60337 910 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 ATG7O95352 703 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 PARNO95453 639 aaKnown RBP11.79□□□□□ -0.52
TOP3A-212ENST00000582122 RAG1P15918 1043 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 TCF7P36402 384 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-212ENST00000582122 JAK3P52333 1124 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 ACTR2P61160 394 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-212ENST00000582122 KIAA0753Q2KHM9 967 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 PLPPR4Q7Z2D5 763 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 GLG1Q92896 1179 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 TNFRSF25Q93038 417 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 C16orf70Q9BSU1 422 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 TEKT3Q9BXF9 490 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 PCDHA10Q9Y5I2 948 aa11.79□□□□□ -0.52
TOP3A-212ENST00000582122 WDR64B1ANS9 1081 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 CCNT1O60563 726 aaKnown RBP11.78□□□□□ -0.52
TOP3A-212ENST00000582122 DKC1O60832 514 aaKnown RBP eCLIP11.78□□□□□ -0.52
TOP3A-212ENST00000582122 LGR5O75473 907 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 CD2BP2O95400 341 aaKnown RBP11.78□□□□□ -0.52
TOP3A-212ENST00000582122 CD4P01730 458 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 PSAPP07602 524 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 ZNF286BP0CG31 522 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 U2AF2P26368 475 aaKnown RBP eCLIP11.78□□□□□ -0.52
TOP3A-212ENST00000582122 GJB2P29033 226 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 MAGEA10P43363 369 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-212ENST00000582122 PSMC6P62333 389 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 FAAP100Q0VG06 881 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 NR5A1Q13285 461 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 ITGB3BPQ13352 177 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-212ENST00000582122 BFSP2Q13515 415 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 LRCH2Q5VUJ6 765 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 KAT2BQ92831 832 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 LENG9Q96B70 501 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 PRDM5Q9NQX1 630 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-212ENST00000582122 PDLIM7Q9NR12 457 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 GRIN2DO15399 1336 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 NRCAMQ92823 1304 aa11.78□□□□□ -0.52
TOP3A-212ENST00000582122 GSTTP1A0A1W2PQM5 241 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 RRN3P2A6NIE6 340 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 ADAMTS3O15072 1205 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 MSH4O15457 936 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 DHX15O43143 795 aaKnown RBP11.77□□□□□ -0.53
TOP3A-212ENST00000582122 TIMP1P01033 207 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 HSP90AA1P07900 732 aaKnown RBP11.77□□□□□ -0.53
TOP3A-212ENST00000582122 PTGS1P23219 599 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 STAT5BP51692 787 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 SP4Q02446 784 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 PTGISQ16647 500 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 UTP14CQ5TAP6 766 aaKnown RBP11.77□□□□□ -0.53
TOP3A-212ENST00000582122 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.53
TOP3A-212ENST00000582122 ABHD15Q6UXT9 468 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 TMEM199Q8N511 208 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 AFAP1L1Q8TED9 768 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 FAM167AQ96KS9 214 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 UBE2OQ9C0C9 1292 aaKnown RBP11.77□□□□□ -0.53
TOP3A-212ENST00000582122 GJB4Q9NTQ9 266 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 MTMR10Q9NXD2 777 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 TBX21Q9UL17 535 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
TOP3A-212ENST00000582122 IGKV6D-21A0A0A0MT36 114 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 C17orf102A2RUQ5 167 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 BACH1O14867 736 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 SORBS3O60504 671 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 B4GALT4O60513 344 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 NEMFO60524 1076 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 CAND2O75155 1236 aa11.76□□□□□ -0.53
TOP3A-212ENST00000582122 PSMD10O75832 226 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms