RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 LGR5O75473 907 aa17.15■□□□□ 0.34
ATPAF2-211ENST00000581698 SMIM10L2AP0DMW4 78 aa17.15■□□□□ 0.34
ATPAF2-211ENST00000581698 SMIM10L2BP0DMW5 78 aa17.15■□□□□ 0.34
ATPAF2-211ENST00000581698 TCF7P36402 384 aaPredicted RBP17.15■□□□□ 0.34
ATPAF2-211ENST00000581698 PTGISQ16647 500 aa17.15■□□□□ 0.34
ATPAF2-211ENST00000581698 GLT8D2Q9H1C3 349 aa17.15■□□□□ 0.34
ATPAF2-211ENST00000581698 TUT1Q9H6E5 874 aaKnown RBP17.15■□□□□ 0.34
ATPAF2-211ENST00000581698 NFASCO94856 1347 aa17.15■□□□□ 0.34
ATPAF2-211ENST00000581698 IGKV6D-21A0A0A0MT36 114 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 CPLX1O14810 134 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 ATG7O95352 703 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 UTP14CQ5TAP6 766 aaKnown RBP17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 BLIDQ8IZY5 108 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 CCDC148Q8NFR7 591 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 CCDC12Q8WUD4 166 aaPredicted RBP17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 GJA10Q969M2 543 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 ZBTB10Q96DT7 871 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 MBOAT7Q96N66 472 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 C22orf23Q9BZE7 217 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 IL23AQ9NPF7 189 aa17.14■□□□□ 0.33
ATPAF2-211ENST00000581698 WNT7AO00755 349 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 MAFGO15525 162 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 TREHO43280 583 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 TDP2O95551 362 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 GNA11P29992 359 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 ACTR2P61160 394 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 ANKRD1Q15327 319 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 MARCH8Q5T0T0 291 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 SERINC5Q86VE9 423 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 PLA2G4DQ86XP0 818 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 TRIM22Q8IYM9 498 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 CDHR1Q96JP9 859 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 JPH1Q9HDC5 661 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 ORC3Q9UBD5 711 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 SLC9A2Q9UBY0 812 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 EMSYQ7Z589 1322 aa17.13■□□□□ 0.33
ATPAF2-211ENST00000581698 PITPNM1O00562 1244 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 MSH4O15457 936 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 IQCF3P0C7M6 154 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 SUPT20HL2P0C7V6 817 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 ATP4AP20648 1035 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 NLRP5P59047 1200 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 Q7L0L9 218 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 C7orf31Q8N865 590 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 LMBR1Q8WVP7 490 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 EHMT1Q9H9B1 1298 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 SETD4Q9NVD3 440 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 REV3LO60673 3130 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 TRANK1O15050 2925 aa17.12■□□□□ 0.33
ATPAF2-211ENST00000581698 GRXCR1A8MXD5 290 aa17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 NBNO60934 754 aa17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 CKBP12277 381 aa17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 PPIGQ13427 754 aaKnown RBP eCLIP17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 B3GNT9Q6UX72 402 aa17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 ABHD15Q6UXT9 468 aa17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 RUFY4Q6ZNE9 571 aa17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 CCDC60Q8IWA6 550 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 TMEM199Q8N511 208 aa17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 GIMAP8Q8ND71 665 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 SEPT1Q8WYJ6 367 aa17.11■□□□□ 0.33
ATPAF2-211ENST00000581698 CYP3A7-CYP3A51PA0A087WV96 503 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 DDX39AO00148 427 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 IPO5O00410 1097 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 SLC37A4O43826 429 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 CYP3A7P24462 503 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 MARK3P27448 753 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 NR5A1Q13285 461 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 PTK7Q13308 1070 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 PRR16Q569H4 304 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 ZNF618Q5T7W0 954 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 FAM177A1Q8N128 213 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 HERVK_113Q902F9 699 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 RNPC3Q96LT9 517 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 TBC1D32Q96NH3 1257 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 LIMCH1Q9UPQ0 1083 aa17.1■□□□□ 0.33
ATPAF2-211ENST00000581698 PRUNE2Q8WUY3 3088 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 MBLAC1A4D2B0 266 aaPredicted RBP17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 ZBTB42B2RXF5 422 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 CDKL5O76039 1030 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 INF2Q27J81 1249 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 MCTP2Q6DN12 878 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 CCDC83Q8IWF9 413 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 ETNPPLQ8TBG4 499 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 BICD2Q8TD16 824 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 SLC5A5Q92911 643 aa17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 TTYH1Q9H313 450 aaPredicted RBP17.09■□□□□ 0.33
ATPAF2-211ENST00000581698 C17orf102A2RUQ5 167 aa17.08■□□□□ 0.32
ATPAF2-211ENST00000581698 CXCL10P02778 98 aa17.08■□□□□ 0.32
ATPAF2-211ENST00000581698 PBX2P40425 430 aa17.08■□□□□ 0.32
ATPAF2-211ENST00000581698 USP11P51784 963 aa17.08■□□□□ 0.32
ATPAF2-211ENST00000581698 FOSBP53539 338 aa17.08■□□□□ 0.32
ATPAF2-211ENST00000581698 UGCGQ16739 394 aa17.08■□□□□ 0.32
ATPAF2-211ENST00000581698 Q4G0T1 1027 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms