RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 HERC4Q5GLZ8 1057 aaPredicted RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 BLIDQ8IZY5 108 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 ATP11CQ8NB49 1132 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 KLC4Q9NSK0 619 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 MORC2Q9Y6X9 1032 aaPredicted RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 ZNF197O14709 1029 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 RPN1P04843 607 aaKnown RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 TMED10P49755 219 aaKnown RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 ADCY7P51828 1080 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 BPIFB4P59827 614 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 SCYL3Q8IZE3 742 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 SIX6OS1Q8N1H7 587 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 FOXP1Q9H334 677 aaPredicted RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 ABCB6Q9NP58 842 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 SAP30BPQ9UHR5 308 aaKnown RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 RPAP1Q9BWH6 1393 aaPredicted RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 RHOBTB1O94844 696 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 KRT6AP02538 564 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 KRT6BP04259 564 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 KRT6CP48668 564 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 MRPS35P82673 323 aaKnown RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 TRIM32Q13049 653 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 CC2D1AQ6P1N0 951 aaPredicted RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 TPTE2Q6XPS3 522 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 PALB2Q86YC2 1186 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 TRIM45Q9H8W5 580 aaPredicted RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 AATFQ9NY61 560 aaKnown RBP eCLIP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 USP6P35125 1406 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 A0A0B4J269 797 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 NEK2P51955 445 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 TFAP4Q01664 338 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 TUBB3Q13509 450 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 SLC44A4Q53GD3 710 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 NLRP7Q8WX94 980 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 ADAM21Q9UKJ8 722 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 ARIH1Q9Y4X5 557 aaPredicted RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 SH2B2O14492 632 aaPredicted RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 TSPAN9O75954 239 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 PDAP1Q13442 181 aaKnown RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 PI16Q6UXB8 463 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 SMYD4Q8IYR2 804 aaPredicted RBP8.03□□□□□ -1.12
CMTM4-205ENST00000581487 ANKRD13CQ8N6S4 541 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 MAD1L1Q9Y6D9 718 aa8.03□□□□□ -1.12
CMTM4-205ENST00000581487 BUB1O43683 1085 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 FLOT1O75955 427 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 SCG2P13521 617 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 KRT4P19013 534 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 PTPN9P43378 593 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 IQCB1Q15051 598 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 SNX30Q5VWJ9 437 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 AIFM3Q96NN9 605 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 STX18Q9P2W9 335 aaKnown RBP8.02□□□□□ -1.12
CMTM4-205ENST00000581487 YEATS2Q9ULM3 1422 aa8.02□□□□□ -1.12
CMTM4-205ENST00000581487 SNTNA6NMZ2 147 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 SPOPO43791 374 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 ZMYND10O75800 440 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 RFC4P35249 363 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 IFNAR2P48551 515 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 KRT76Q01546 638 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 APBA1Q02410 837 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 MAP3K10Q02779 954 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 ICA1Q05084 483 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 UBE3AQ05086 875 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 TRIM71Q2Q1W2 868 aaKnown RBP8.02□□□□□ -1.13
CMTM4-205ENST00000581487 HAUS3Q68CZ6 603 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 THOC1Q96FV9 657 aaKnown RBP8.02□□□□□ -1.13
CMTM4-205ENST00000581487 PUS7LQ9H0K6 701 aaKnown RBP8.02□□□□□ -1.13
CMTM4-205ENST00000581487 HOMER3Q9NSC5 361 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 USP17L12C9JPN9 530 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 USP17L21D6R901 530 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 TBC1D8O95759 1140 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 MSH2P43246 934 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 SHQ1Q6PI26 577 aaKnown RBP8.02□□□□□ -1.13
CMTM4-205ENST00000581487 PEX26Q7Z412 305 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 FMR1NBQ8N0W7 255 aaPredicted RBP8.02□□□□□ -1.13
CMTM4-205ENST00000581487 RDH13Q8NBN7 331 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 FHDC1Q9C0D6 1143 aaPredicted RBP8.02□□□□□ -1.13
CMTM4-205ENST00000581487 CACNA2D2Q9NY47 1150 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 TBC1D7Q9P0N9 293 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 MCF2LO15068 1137 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 EVI5O60447 810 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 MYO1EQ12965 1108 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 PTGDRQ13258 359 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 B4GALNT2Q8NHY0 566 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 SCYL1Q96KG9 808 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 NYXQ9GZU5 481 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 CAB39Q9Y376 341 aaPredicted RBP8.02□□□□□ -1.13
CMTM4-205ENST00000581487 ROBO2Q9HCK4 1378 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 PEX1O43933 1283 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 MMP1P03956 469 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 IFNAR1P17181 557 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 CTSWP56202 376 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 KRT17Q04695 432 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 SLC12A1Q13621 1099 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 LAMB3Q13751 1172 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 DDB1Q16531 1140 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 C7orf25Q9BPX7 421 aa8.02□□□□□ -1.13
CMTM4-205ENST00000581487 LSM14BQ9BX40 385 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms