RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 AQP7O14520 342 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 GPR85P60893 370 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 NKX3-2P78367 333 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 GUCY1A3Q02108 690 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 TESK1Q15569 626 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 CHRNA2Q15822 529 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 PTPROQ16827 1216 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 ZXDCQ2QGD7 858 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 RGL3Q3MIN7 710 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 MCTP2Q6DN12 878 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 MTDHQ86UE4 582 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 LRRTM3Q86VH5 581 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 TTLL6Q8N841 843 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 KYQ8NBH2 561 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 ADAMTS17Q8TE56 1095 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 GPATCH3Q96I76 525 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 GORASP1Q9BQQ3 440 aa6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 C11orf84Q9BUA3 381 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 MAGEC2Q9UBF1 373 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 TNPO3Q9Y5L0 923 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-205ENST00000581383 A0A087X0B3 334 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 NOBOXO60393 691 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 CYP1A1P04798 512 aaPredicted RBP6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 C8BP07358 591 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 INSRRP14616 1297 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 BCL6P41182 706 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 PUM1Q14671 1186 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 LBX2Q6XYB7 198 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 ZNF761Q86XN6 746 aaPredicted RBP6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 FAM26EQ8N5C1 309 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 CHST13Q8NET6 341 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 DPF3Q92784 378 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 LOXL4Q96JB6 756 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 PUS7Q96PZ0 661 aaKnown RBP6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 ZFYVE21Q9BQ24 234 aa6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 SPATA6Q9NWH7 488 aaPredicted RBP6.65□□□□□ -1.34
SMCHD1-205ENST00000581383 TCRBV16S1A1N1A0A5B0 115 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 SGSM2O43147 1006 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 OPA1O60313 960 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 PDE8AO60658 829 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 STAT5AP42229 794 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 ZNF460Q14592 562 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 LGI4Q8N135 537 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 TARS2Q9BW92 718 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 TMX1Q9H3N1 280 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 INTS7Q9NVH2 962 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 COL4A3BPQ9Y5P4 624 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 DUSP10Q9Y6W6 482 aa6.64□□□□□ -1.35
SMCHD1-205ENST00000581383 DDX3XO00571 662 aaKnown RBP eCLIP6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 PPM1GO15355 546 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 ASLP04424 464 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 APPP05067 770 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 SRGAP2CP0DJJ0 459 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 RPL13P26373 211 aaKnown RBP6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 THBS2P35442 1172 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 NEK4P51957 841 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 THNSL2Q86YJ6 484 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 UBR7Q8N806 425 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 ALG1Q9BT22 464 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 L2HGDHQ9H9P8 463 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 SMPD4Q9NXE4 827 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 CLDND1Q9NY35 253 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 FBXL7Q9UJT9 491 aa6.63□□□□□ -1.35
SMCHD1-205ENST00000581383 MROH6A6NGR9 719 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 DGKIO75912 1065 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 VIL1P09327 827 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 IBSPP21815 317 aaPredicted RBP6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 CNGA1P29973 690 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 IGFALSP35858 605 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 SLC6A11P48066 632 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 DLX2Q07687 328 aaPredicted RBP6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 PAK1Q13153 545 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 LSAMPQ13449 338 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 KIZQ2M2Z5 673 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 GLB1LQ6UWU2 654 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 HHIPL2Q6UWX4 724 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 GGNQ86UU5 652 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 ZC3H7AQ8IWR0 971 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 FAM126BQ8IXS8 530 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 LINC00482Q8N8I6 264 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 ZCRB1Q8TBF4 217 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 CHAC2Q8WUX2 184 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 CLIC6Q96NY7 704 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 SYT3Q9BQG1 590 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 JADE2Q9NQC1 790 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 CROTQ9UKG9 612 aa6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 CNOT11Q9UKZ1 510 aaKnown RBP6.62□□□□□ -1.35
SMCHD1-205ENST00000581383 GSG1L2A8MUP6 293 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 HGSO14964 777 aaPredicted RBP6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 MAFKO60675 156 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 CYP7B1O75881 506 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 SOD2P04179 222 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 JMJD7P0C870 316 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 NAT1P18440 290 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 STAT3P40763 770 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 EFEMP1Q12805 493 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 STEAP3Q658P3 488 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 ABHD17CQ6PCB6 329 aa6.61□□□□□ -1.35
SMCHD1-205ENST00000581383 KRT26Q7Z3Y9 468 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms