RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 RBAK-RBAKDNI3L0D1 243 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 GNAQP50148 359 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 PUS10Q3MIT2 529 aaKnown RBP12.21□□□□□ -0.45
RFFL-209ENST00000581265 LEXMQ3ZCV2 418 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 FAM26DQ5JW98 314 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 RPAINQ86UA6 219 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 NLRX1Q86UT6 975 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 MYOCDQ8IZQ8 938 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 C17orf80Q9BSJ5 609 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 OSBPL7Q9BZF2 842 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 SEC63Q9UGP8 760 aaKnown RBP12.21□□□□□ -0.45
RFFL-209ENST00000581265 ZNF215Q9UL58 517 aaPredicted RBP12.21□□□□□ -0.45
RFFL-209ENST00000581265 TELO2Q9Y4R8 837 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 RBM8AQ9Y5S9 174 aaKnown RBP12.21□□□□□ -0.45
RFFL-209ENST00000581265 XIRP2A4UGR9 3374 aa12.21□□□□□ -0.45
RFFL-209ENST00000581265 NRCAMQ92823 1304 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.2□□□□□ -0.46
RFFL-209ENST00000581265 IL9P15248 144 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 MCM5P33992 734 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 LIFRP42702 1097 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 FOXK2Q01167 660 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 CASC1Q6TDU7 716 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 TRIM50Q86XT4 487 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 SRBD1Q8N5C6 995 aaKnown RBP12.2□□□□□ -0.46
RFFL-209ENST00000581265 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 LMBR1Q8WVP7 490 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 APBB2Q92870 758 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 GPRASP2Q96D09 838 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 CDHR1Q96JP9 859 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 TMEM87BQ96K49 555 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 SAMD11Q96NU1 681 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 MYL10Q9BUA6 226 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 PSTPIP2Q9H939 334 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 FAM50BQ9Y247 325 aa12.2□□□□□ -0.46
RFFL-209ENST00000581265 SH2B2O14492 632 aaPredicted RBP12.19□□□□□ -0.46
RFFL-209ENST00000581265 MAFGO15525 162 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 PRC1O43663 620 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 ATP9AO75110 1047 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 CTSHP09668 335 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 CALM1P0DP23 149 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 CALM2P0DP24 149 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 CALM3P0DP25 149 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 ARHGAP4P98171 946 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 EPC2Q52LR7 807 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 UTP14CQ5TAP6 766 aaKnown RBP12.19□□□□□ -0.46
RFFL-209ENST00000581265 TAF2Q6P1X5 1199 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.19□□□□□ -0.46
RFFL-209ENST00000581265 SEPT1Q8WYJ6 367 aa12.19□□□□□ -0.46
RFFL-209ENST00000581265 MRPL38Q96DV4 380 aaKnown RBP12.19□□□□□ -0.46
RFFL-209ENST00000581265 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
RFFL-209ENST00000581265 MICAL3Q7RTP6 2002 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 GSTTP1A0A1W2PQM5 241 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 CCDC69A6NI79 296 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 H3BNC9 293 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 PLEKHA8P1O95397 391 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 CHRNA1P02708 482 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 KCNA2P16389 499 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 ITGB5P18084 799 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 TCF7P36402 384 aaPredicted RBP12.18□□□□□ -0.46
RFFL-209ENST00000581265 PTPN5P54829 565 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 SP4Q02446 784 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 COL9A3Q14050 684 aaPredicted RBP12.18□□□□□ -0.46
RFFL-209ENST00000581265 PTPROQ16827 1216 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 NFXL1Q6ZNB6 911 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 CMTR1Q8N1G2 835 aaKnown RBP12.18□□□□□ -0.46
RFFL-209ENST00000581265 YME1L1Q96TA2 773 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 IFIH1Q9BYX4 1025 aaKnown RBP12.18□□□□□ -0.46
RFFL-209ENST00000581265 LSG1Q9H089 658 aaKnown RBP12.18□□□□□ -0.46
RFFL-209ENST00000581265 EHMT1Q9H9B1 1298 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 ERAP1Q9NZ08 941 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
RFFL-209ENST00000581265 MBLAC1A4D2B0 266 aaPredicted RBP12.17□□□□□ -0.46
RFFL-209ENST00000581265 GRXCR2A6NFK2 248 aa12.17□□□□□ -0.46
RFFL-209ENST00000581265 SLC27A2O14975 620 aa12.17□□□□□ -0.46
RFFL-209ENST00000581265 UPP2O95045 317 aa12.17□□□□□ -0.46
RFFL-209ENST00000581265 NECTIN1Q15223 517 aa12.17□□□□□ -0.46
RFFL-209ENST00000581265 HFE2Q6ZVN8 426 aa12.17□□□□□ -0.46
RFFL-209ENST00000581265 TMEM192Q8IY95 271 aa12.17□□□□□ -0.46
RFFL-209ENST00000581265 FANCBQ8NB91 859 aa12.17□□□□□ -0.46
RFFL-209ENST00000581265 SLC12A7Q9Y666 1083 aa12.17□□□□□ -0.46
RFFL-209ENST00000581265 KAT6AQ92794 2004 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 SIP14410 1827 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 POTEB3A0JP26 581 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 SPDYE3A6NKU9 549 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 RXRAP19793 462 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 PPFIA1Q13136 1202 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 GPM6BQ13491 265 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 MTMR1Q13613 665 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 COL19A1Q14993 1142 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 MARCH8Q5T0T0 291 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 CREB3L3Q68CJ9 461 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 POTEBQ6S5H4 581 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 TMTC3Q6ZXV5 915 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 RSPH3Q86UC2 560 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 SGMS1Q86VZ5 419 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 TEX2Q8IWB9 1127 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 IL17RAQ96F46 866 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 PHOX2BQ99453 314 aa12.16□□□□□ -0.46
RFFL-209ENST00000581265 SMARCAD1Q9H4L7 1026 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms