RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 NRIP1P48552 1158 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 DGKDQ16760 1214 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 MCTP2Q6DN12 878 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 CEP85Q6P2H3 762 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 GIMAP6Q6P9H5 292 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 DNERQ8NFT8 737 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 VN1R2Q8NFZ6 395 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 SPPL3Q8TCT6 385 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 FRAT1Q92837 279 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 ZNF689Q96CS4 500 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 SMOC2Q9H3U7 446 aa9.09□□□□□ -0.95
SMARCE1-217ENST00000580654 LCE2BO14633 110 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 IPO8O15397 1037 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 PPP1R37O75864 691 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 BRD1O95696 1058 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 ITGB1P05556 798 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 TSPY3P0CV98 308 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 TSPY8P0CW00 308 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 HOXC8P31273 242 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 TFAP4Q01664 338 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 BTNL9Q6UXG8 535 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 SEPT14Q6ZU15 432 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 RBM23Q86U06 439 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 ERC1Q8IUD2 1116 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 KREMEN2Q8NCW0 462 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 ATP8B4Q8TF62 1192 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 COL26A1Q96A83 441 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 HAUS7Q99871 368 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 KATNAL1Q9BW62 490 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 PLVAPQ9BX97 442 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 IL17RBQ9NRM6 502 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 DDX41Q9UJV9 622 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 RWDD3Q9Y3V2 267 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 TTC3P53804 2025 aa9.08□□□□□ -0.96
SMARCE1-217ENST00000580654 ANP32CO43423 234 aa9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 NMT2O60551 498 aa9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 CTSHP09668 335 aa9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 HOXD8P13378 290 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 ATP5JP18859 108 aa9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 PUM1Q14671 1186 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 CWF19L1Q69YN2 538 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 KIAA2013Q8IYS2 634 aa9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 P2RX5Q93086 422 aa9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 EMID1Q96A84 441 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 S1PR5Q9H228 398 aa9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 DLL3Q9NYJ7 618 aa9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 MRPL42Q9Y6G3 142 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 FAM208BQ5VWN6 2430 aa9.07□□□□□ -0.96
SMARCE1-217ENST00000580654 TREHO43280 583 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 SP100P23497 879 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 NOVP48745 357 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 DSG2Q14126 1118 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 BTG3Q14201 252 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 SYDE2Q5VT97 1194 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 DHX37Q8IY37 1157 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 CLASRPQ8N2M8 674 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 KLHL23Q8NBE8 558 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 PPTC7Q8NI37 304 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 POF1BQ8WVV4 589 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 TBC1D5Q92609 795 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 OSBP2Q969R2 916 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 MPHOSPH6Q99547 160 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 C16orf70Q9BSU1 422 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 COL20A1Q9P218 1284 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 CDH22Q9UJ99 828 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 MTMR7Q9Y216 660 aa9.06□□□□□ -0.96
SMARCE1-217ENST00000580654 FANCMQ8IYD8 2048 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 PER2O15055 1255 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 PI15O43692 258 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 DGKIO75912 1065 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 IFIT2P09913 472 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 RLBP1P12271 317 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 CLCN5P51795 746 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 KCNC3Q14003 757 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 CCDC96Q2M329 555 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 SYCE2Q6PIF2 218 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 ZBTB33Q86T24 672 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 UBALD2Q8IYN6 164 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 CRIPAKQ8N1N5 446 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 DCAF4Q8WV16 495 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 APBB2Q92870 758 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 ATP6V0A1Q93050 837 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 PPP2R3CQ969Q6 453 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 TAAR1Q96RJ0 339 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 ZNF287Q9HBT7 754 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 STX8Q9UNK0 236 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 SORCS3Q9UPU3 1222 aa9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 FASNP49327 2511 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-217ENST00000580654 DOCK5Q9H7D0 1870 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 C17orf102A2RUQ5 167 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 M0R2C6 588 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 ENPP3O14638 875 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 CAND2O75155 1236 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 NPR3P17342 541 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 TDO2P48775 406 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 FOSBP53539 338 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 MTMR3Q13615 1198 aa9.04□□□□□ -0.96
SMARCE1-217ENST00000580654 LAMC2Q13753 1193 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms