RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 CDHR1Q96JP9 859 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 TSEN34Q9BSV6 310 aaKnown RBP13.76□□□□□ -0.21
CCDC84-209ENST00000580556 C1QTNF1Q9BXJ1 281 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 ATP6V1DQ9Y5K8 247 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 MYH7BA7E2Y1 1941 aa13.76□□□□□ -0.21
CCDC84-209ENST00000580556 RBM47A0AV96 593 aaKnown RBP13.75□□□□□ -0.21
CCDC84-209ENST00000580556 FAM86B1E9PN63 330 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 ADCY6O43306 1168 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 FIBPO43427 364 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 RGS20O76081 388 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 FAM86B2P0C5J1 330 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 TGFB3P10600 412 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 MYOGP15173 224 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 ITGB5P18084 799 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 ICAM3P32942 547 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 CYP2C18P33260 490 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 ZNF76P36508 570 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 TOB1P50616 345 aaPredicted RBP13.75□□□□□ -0.21
CCDC84-209ENST00000580556 RABGGTBP53611 331 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 ACVR2BQ13705 512 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 LETM2Q2VYF4 491 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 TTC38Q5R3I4 469 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 ATL3Q6DD88 541 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 KCNV1Q6PIU1 500 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 NLRX1Q86UT6 975 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 LENG9Q96B70 501 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 MXRA8Q9BRK3 442 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 JADE2Q9NQC1 790 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 CHMP5Q9NZZ3 219 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 MSRAQ9UJ68 235 aa13.75□□□□□ -0.21
CCDC84-209ENST00000580556 UMODL1Q5DID0 1318 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 MOXD2PA6NHM9 499 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 RFXAPO00287 272 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 CCNT1O60563 726 aaKnown RBP13.74□□□□□ -0.21
CCDC84-209ENST00000580556 BMP15O95972 392 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 MTMR1Q13613 665 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 RAB30Q15771 203 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 TAPT1Q6NXT6 567 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 FBXO16Q8IX29 292 aaPredicted RBP13.74□□□□□ -0.21
CCDC84-209ENST00000580556 TMEM199Q8N511 208 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 SLC28A3Q9HAS3 691 aa13.74□□□□□ -0.21
CCDC84-209ENST00000580556 DDX25Q9UHL0 483 aaKnown RBP13.74□□□□□ -0.21
CCDC84-209ENST00000580556 MORC2Q9Y6X9 1032 aaPredicted RBP13.74□□□□□ -0.21
CCDC84-209ENST00000580556 SPATA31C2B4DYI2 1134 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 LAD1O00515 517 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 TBX3O15119 743 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 TDP2O95551 362 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 ASGR1P07306 291 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 TTLL4Q14679 1199 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 PRR16Q569H4 304 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 PSRC1Q6PGN9 363 aaPredicted RBP13.73□□□□□ -0.21
CCDC84-209ENST00000580556 PLA2G4DQ86XP0 818 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 FAM126BQ8IXS8 530 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 CYP2W1Q8TAV3 490 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 HERVK_113Q902F9 699 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 KHSRPQ92945 711 aaKnown RBP eCLIP13.73□□□□□ -0.217e-9■□□□□ 11.1
CCDC84-209ENST00000580556 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 GLT1D1Q96MS3 346 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 ZNF396Q96N95 335 aaPredicted RBP13.73□□□□□ -0.21
CCDC84-209ENST00000580556 SENP7Q9BQF6 1050 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 KCNMB3Q9NPA1 279 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 IL23AQ9NPF7 189 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.73□□□□□ -0.21
CCDC84-209ENST00000580556 KCNH7Q9NS40 1196 aa13.73□□□□□ -0.21
CCDC84-209ENST00000580556 ZHX1Q9UKY1 873 aaPredicted RBP13.73□□□□□ -0.21
CCDC84-209ENST00000580556 DDX49Q9Y6V7 483 aaKnown RBP13.73□□□□□ -0.21
CCDC84-209ENST00000580556 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 ARVCFO00192 962 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 WNT7AO00755 349 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 NKRFO15226 690 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCDC84-209ENST00000580556 SLC37A4O43826 429 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 NEMFO60524 1076 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 C6orf222P0C671 652 aaPredicted RBP13.72□□□□□ -0.21
CCDC84-209ENST00000580556 SEMA3FQ13275 785 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 SKIV2LQ15477 1246 aaKnown RBP13.72□□□□□ -0.21
CCDC84-209ENST00000580556 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 GIMAP8Q8ND71 665 aaPredicted RBP13.72□□□□□ -0.21
CCDC84-209ENST00000580556 ETNPPLQ8TBG4 499 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 WDR11Q9BZH6 1224 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 AGO4Q9HCK5 861 aaKnown RBP13.72□□□□□ -0.21
CCDC84-209ENST00000580556 POLR3EQ9NVU0 708 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 RTEL1Q9NZ71 1219 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 FAM184BQ9ULE4 1060 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 CEP131Q9UPN4 1083 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 MRVI1Q9Y6F6 885 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 MYH15Q9Y2K3 1946 aa13.72□□□□□ -0.21
CCDC84-209ENST00000580556 ELP1O95163 1332 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 MROH7Q68CQ1 1323 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 MCM3APO60318 1980 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 DUSP11O75319 330 aaKnown RBP13.71□□□□□ -0.21
CCDC84-209ENST00000580556 FGBP02675 491 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 KCNA2P16389 499 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 MCM7P33993 719 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 NASPP49321 788 aaPredicted RBP13.71□□□□□ -0.21
CCDC84-209ENST00000580556 CCDC144BQ3MJ40 725 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 DUSP28Q4G0W2 176 aa13.71□□□□□ -0.21
CCDC84-209ENST00000580556 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms