RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 PRR16Q569H4 304 aa18.63■□□□□ 0.57
IFT20-210ENST00000580357 UTP14CQ5TAP6 766 aaKnown RBP18.63■□□□□ 0.57
IFT20-210ENST00000580357 RETREG2Q8NC44 543 aa18.63■□□□□ 0.57
IFT20-210ENST00000580357 AZI2Q9H6S1 392 aa18.63■□□□□ 0.57
IFT20-210ENST00000580357 TRMT13Q9NUP7 481 aaKnown RBP18.63■□□□□ 0.57
IFT20-210ENST00000580357 PKD2L1Q9P0L9 805 aa18.63■□□□□ 0.57
IFT20-210ENST00000580357 KIF3AQ9Y496 699 aa18.63■□□□□ 0.57
IFT20-210ENST00000580357 SAFBQ15424 915 aaKnown RBP eCLIP18.62■□□□□ 0.57
IFT20-210ENST00000580357 Q4G0T1 1027 aa18.62■□□□□ 0.57
IFT20-210ENST00000580357 PLPPR4Q7Z2D5 763 aa18.62■□□□□ 0.57
IFT20-210ENST00000580357 RPUSD2Q8IZ73 545 aaKnown RBP18.62■□□□□ 0.57
IFT20-210ENST00000580357 TDHQ8IZJ6 230 aa18.62■□□□□ 0.57
IFT20-210ENST00000580357 FAM184AQ8NB25 1140 aa18.62■□□□□ 0.57
IFT20-210ENST00000580357 GLG1Q92896 1179 aa18.62■□□□□ 0.57
IFT20-210ENST00000580357 NOC4LQ9BVI4 516 aaKnown RBP18.62■□□□□ 0.57
IFT20-210ENST00000580357 ERAP1Q9NZ08 941 aa18.62■□□□□ 0.57
IFT20-210ENST00000580357 SZT2Q5T011 3432 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 C17orf102A2RUQ5 167 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 PITPNM1O00562 1244 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 DHX15O43143 795 aaKnown RBP18.61■□□□□ 0.57
IFT20-210ENST00000580357 JAK2O60674 1132 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 LGR5O75473 907 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 PARNO95453 639 aaKnown RBP18.61■□□□□ 0.57
IFT20-210ENST00000580357 MMP1P03956 469 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 GCFC2P16383 781 aaKnown RBP18.61■□□□□ 0.57
IFT20-210ENST00000580357 ITGB8P26012 769 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 SLC26A2P50443 739 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 ACTR2P61160 394 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 KRT76Q01546 638 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 PTK7Q13308 1070 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 ITGB3BPQ13352 177 aaPredicted RBP18.61■□□□□ 0.57
IFT20-210ENST00000580357 PPP4R3AQ6IN85 833 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 GDF6Q6KF10 455 aaPredicted RBP18.61■□□□□ 0.57
IFT20-210ENST00000580357 ZNF746Q6NUN9 644 aaPredicted RBP18.61■□□□□ 0.57
IFT20-210ENST00000580357 NEK8Q86SG6 692 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 CAGE1Q8TC20 777 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 RIT2Q99578 217 aa18.61■□□□□ 0.57
IFT20-210ENST00000580357 EMSYQ7Z589 1322 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 NRCAMQ92823 1304 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 CYP2C9P11712 490 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 STAT5BP51692 787 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 ST3GAL1Q11201 340 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 FAM160B1Q5W0V3 765 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 KRT40Q6A162 431 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 MIS18BP1Q6P0N0 1132 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 SMAP1Q8IYB5 467 aaPredicted RBP18.6■□□□□ 0.57
IFT20-210ENST00000580357 C8orf76Q96K31 380 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 MBOAT7Q96N66 472 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 PPP1R12CQ9BZL4 782 aa18.6■□□□□ 0.57
IFT20-210ENST00000580357 EDIL3O43854 480 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 SMIM10L2AP0DMW4 78 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 SMIM10L2BP0DMW5 78 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 CYP2C18P33260 490 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 RFC2P35250 354 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 INF2Q27J81 1249 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 ABHD15Q6UXT9 468 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 PIK3AP1Q6ZUJ8 805 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 RNPEPQ9H4A4 650 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 GJB4Q9NTQ9 266 aa18.59■□□□□ 0.57
IFT20-210ENST00000580357 IGKV6D-21A0A0A0MT36 114 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 RRN3P2A6NIE6 340 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 MSH4O15457 936 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 PSAPP07602 524 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 PFKMP08237 780 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 HOXC8P31273 242 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 RBL2Q08999 1139 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 LETM2Q2VYF4 491 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 LRIT3Q3SXY7 679 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 OXER1Q8TDS5 423 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 AFAP1L1Q8TED9 768 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 ATP6V0A1Q93050 837 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 LENG9Q96B70 501 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 TMX3Q96JJ7 454 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 FAM20AQ96MK3 541 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 IL23AQ9NPF7 189 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 DDX25Q9UHL0 483 aaKnown RBP18.58■□□□□ 0.56
IFT20-210ENST00000580357 PCDHA10Q9Y5I2 948 aa18.58■□□□□ 0.56
IFT20-210ENST00000580357 BTBD18B2RXH4 712 aa18.57■□□□□ 0.56
IFT20-210ENST00000580357 TBX3O15119 743 aa18.57■□□□□ 0.56
IFT20-210ENST00000580357 GAS7O60861 476 aa18.57■□□□□ 0.56
IFT20-210ENST00000580357 BAG4O95429 457 aaKnown RBP18.57■□□□□ 0.56
IFT20-210ENST00000580357 RPLP2P05387 115 aaKnown RBP18.57■□□□□ 0.56
IFT20-210ENST00000580357 CSF2RAP15509 400 aa18.57■□□□□ 0.56
IFT20-210ENST00000580357 SFNP31947 248 aa18.57■□□□□ 0.56
IFT20-210ENST00000580357 CCL23P55773 120 aa18.57■□□□□ 0.56
IFT20-210ENST00000580357 DIS3L2Q8IYB7 885 aaKnown RBP18.57■□□□□ 0.56
IFT20-210ENST00000580357 FBXO18Q8NFZ0 1043 aa18.57■□□□□ 0.56
IFT20-210ENST00000580357 SLC5A5Q92911 643 aa18.57■□□□□ 0.56
IFT20-210ENST00000580357 TEKT3Q9BXF9 490 aa18.57■□□□□ 0.56
IFT20-210ENST00000580357 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.57■□□□□ 0.56
IFT20-210ENST00000580357 DDX39AO00148 427 aaKnown RBP18.56■□□□□ 0.56
IFT20-210ENST00000580357 BACH1O14867 736 aa18.56■□□□□ 0.56
IFT20-210ENST00000580357 CCNT1O60563 726 aaKnown RBP18.56■□□□□ 0.56
IFT20-210ENST00000580357 DTNBO60941 627 aa18.56■□□□□ 0.56
IFT20-210ENST00000580357 CAND2O75155 1236 aa18.56■□□□□ 0.56
IFT20-210ENST00000580357 FGBP02675 491 aa18.56■□□□□ 0.56
IFT20-210ENST00000580357 IQCF3P0C7M6 154 aa18.56■□□□□ 0.56
IFT20-210ENST00000580357 NR5A1Q13285 461 aa18.56■□□□□ 0.56
IFT20-210ENST00000580357 SHHQ15465 462 aa18.56■□□□□ 0.56
IFT20-210ENST00000580357 LRCH2Q5VUJ6 765 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms