RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 GTF3C6Q969F1 213 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 IL17RAQ96F46 866 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 AIFM3Q96NN9 605 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 FTOQ9C0B1 505 aaKnown RBP eCLIP12.39□□□□□ -0.43
NDEL1-208ENST00000580237 AGO4Q9HCK5 861 aaKnown RBP12.39□□□□□ -0.43
NDEL1-208ENST00000580237 ERAP1Q9NZ08 941 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 ORC3Q9UBD5 711 aaPredicted RBP12.39□□□□□ -0.43
NDEL1-208ENST00000580237 MYO9BQ13459 2157 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 NFASCO94856 1347 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 EMSYQ7Z589 1322 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 FAM86B1E9PN63 330 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 MEIS1O00470 390 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 BACH1O14867 736 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 LARGE1O95461 756 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 FGBP02675 491 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 FAM86B2P0C5J1 330 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 ACTN1P12814 892 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 SELPP16109 830 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 PTK7Q13308 1070 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 ME3Q16798 604 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 TMEM240Q5SV17 173 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 ZNF697Q5TEC3 545 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 GALNT17Q6IS24 598 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 OTOP2Q7RTS6 562 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 UIMC1Q96RL1 719 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 ZNF577Q9BSK1 485 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 SMARCAD1Q9H4L7 1026 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 BRMS1Q9HCU9 246 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 TELO2Q9Y4R8 837 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 LOXHD1Q8IVV2 1947 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
NDEL1-208ENST00000580237 EVPLQ92817 2033 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 CCDC194A0A1B0GVG4 234 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
NDEL1-208ENST00000580237 ADAMTS3O15072 1205 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 CYP3A4P08684 503 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 IQCF3P0C7M6 154 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 THPOP40225 353 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 ACTR2P61160 394 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 SMAD3P84022 425 aaKnown RBP12.37□□□□□ -0.43
NDEL1-208ENST00000580237 ZNF200P98182 395 aaPredicted RBP12.37□□□□□ -0.43
NDEL1-208ENST00000580237 PPFIA1Q13136 1202 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 ITGB3BPQ13352 177 aaPredicted RBP12.37□□□□□ -0.43
NDEL1-208ENST00000580237 TRIM29Q14134 588 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 NONOQ15233 471 aaKnown RBP eCLIP12.37□□□□□ -0.43
NDEL1-208ENST00000580237 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 KRT25Q7Z3Z0 450 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 DEFB123Q8N688 67 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 DAGLBQ8NCG7 672 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 TBCKQ8TEA7 893 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 DHX38Q92620 1227 aaKnown RBP12.37□□□□□ -0.43
NDEL1-208ENST00000580237 SETD4Q9NVD3 440 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 KCNJ14Q9UNX9 436 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 SIP14410 1827 aa12.37□□□□□ -0.43
NDEL1-208ENST00000580237 IGLV3-22A0A075B6J6 115 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.36□□□□□ -0.43
NDEL1-208ENST00000580237 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.36□□□□□ -0.43
NDEL1-208ENST00000580237 GSTTP1A0A1W2PQM5 241 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 DTNBO60941 627 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 PARNO95453 639 aaKnown RBP12.36□□□□□ -0.43
NDEL1-208ENST00000580237 CTSHP09668 335 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 CKBP12277 381 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 FOSBP53539 338 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 FAM160B1Q5W0V3 765 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 MIS18BP1Q6P0N0 1132 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 Q7L0L9 218 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 C16orf59Q7L2K0 433 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 SERINC5Q86VE9 423 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 LMBR1Q8WVP7 490 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 CRYGNQ8WXF5 182 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 HERVK_113Q902F9 699 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 TNPO1Q92973 898 aaKnown RBP12.36□□□□□ -0.43
NDEL1-208ENST00000580237 CTAGE1Q96RT6 745 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 TBC1D22BQ9NU19 505 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 LIMCH1Q9UPQ0 1083 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 SAMM50Q9Y512 469 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 SLC4A7Q9Y6M7 1214 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 NRCAMQ92823 1304 aa12.36□□□□□ -0.43
NDEL1-208ENST00000580237 PTPRSQ13332 1948 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 TREHO43280 583 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 GAS7O60861 476 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 CTDNEP1O95476 244 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 KCNJ6P48051 423 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 STAT5BP51692 787 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 IGBP1P78318 339 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 KRT76Q01546 638 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 RBL2Q08999 1139 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 GRIK4Q16099 956 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 INF2Q27J81 1249 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 CCDC83Q8IWF9 413 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 CKAP2LQ8IYA6 745 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 FAM161BQ96MY7 647 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 PHF20Q9BVI0 1012 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 RNPEPQ9H4A4 650 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 TUBE1Q9UJT0 475 aa12.35□□□□□ -0.43
NDEL1-208ENST00000580237 CHMP2AO43633 222 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 ST18O60284 1047 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 JAK2O60674 1132 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 LGR5O75473 907 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms