RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 FAHP16930 419 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 PTPN1P18031 435 aaKnown RBP3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 SOX5P35711 763 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 NKX3-2P78367 333 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 FOXO4P98177 505 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 GRIN1Q05586 938 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 PAN2Q504Q3 1202 aaKnown RBP3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 BTBD8Q5XKL5 378 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 TEPPQ6URK8 271 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 CD300LDQ6UXZ3 194 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 ATG14Q6ZNE5 492 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 OTOP1Q7RTM1 612 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 THNSL2Q86YJ6 484 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 RBM12BQ8IXT5 1001 aaKnown RBP3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 FAM177A1Q8N128 213 aaPredicted RBP3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 SMARCC2Q8TAQ2 1214 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 CHAC2Q8WUX2 184 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 BOCQ9BWV1 1114 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 MTFR1LQ9H019 292 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 CAAP1Q9H8G2 361 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 CD320Q9NPF0 282 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 B4GALT6Q9UBX8 382 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 SMG5Q9UPR3 1016 aaKnown RBP3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 ZKSCAN5Q9Y2L8 839 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 TELO2Q9Y4R8 837 aa3.17□□□□□ -1.9
PTP4A1-204ENST00000578299 LOC105371045A0A1W2PR82 267 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 FAM90A27PA6NNH2 459 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 SCDO00767 359 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 KCNK3O14649 394 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 GAS7O60861 476 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 DNAJC6O75061 913 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 HIP1RO75146 1068 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 F2P00734 622 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 KRT1P04264 644 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 C1QTNF9P0C862 333 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 STAT3P40763 770 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 MC3RP41968 323 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 STAT5AP42229 794 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 RAP1GAPP47736 663 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 HERVK_113P62684 666 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 IRF9Q00978 393 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 PCBP1Q15365 356 aaKnown RBP eCLIP3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 CR1LQ2VPA4 569 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 PKN3Q6P5Z2 889 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 DDX46Q7L014 1031 aaKnown RBP3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 KRT26Q7Z3Y9 468 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 RNF180Q86T96 592 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 NOSTRINQ8IVI9 506 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 FAM26EQ8N5C1 309 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 OR2W6PQ8NHA6 318 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 LEO1Q8WVC0 666 aaPredicted RBP3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 DLG3Q92796 817 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 SPC25Q9HBM1 224 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 KCNH7Q9NS40 1196 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 RIC8BQ9NVN3 520 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 IFT57Q9NWB7 429 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 CNOT6Q9ULM6 557 aaKnown RBP3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 B3GALT1Q9Y5Z6 326 aa3.16□□□□□ -1.9
PTP4A1-204ENST00000578299 ZNF891A8MT65 544 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 H7C1D1 291 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 ACOT7O00154 380 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 KRT37O76014 449 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 C4BPAP04003 597 aaKnown RBP3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 C8AP07357 584 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 ZBTB48P10074 688 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 PI3P19957 117 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 SDHAP31040 664 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 LIMS1P48059 325 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 SCNN1BP51168 640 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 LINC00310P59036 64 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 CAP1Q01518 475 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 OCRLQ01968 901 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 DSG1Q02413 1049 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 DBPQ10586 325 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 SSPNQ14714 243 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 SART3Q15020 963 aaKnown RBP3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 DHCR24Q15392 516 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 SEC23AQ15436 765 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 SEPT7Q16181 437 aaKnown RBP3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 KCNA10Q16322 511 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 ZNF385BQ569K4 471 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 CT47A1Q5JQC4 288 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 CPZQ66K79 652 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 VASNQ6EMK4 673 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 CC2D1AQ6P1N0 951 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 CNKSR3Q6P9H4 555 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 ZNF662Q6ZS27 426 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 FILIP1Q7Z7B0 1213 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 FAM129CQ86XR2 697 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 TMEFF1Q8IYR6 380 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 TTLL6Q8N841 843 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 LINC00482Q8N8I6 264 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 TMEM209Q96SK2 561 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 KCTD3Q9Y597 815 aa3.15□□□□□ -1.91
PTP4A1-204ENST00000578299 PRAMEF25A6NGN4 478 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 NPIPB6E9PJ23 425 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 CYP17A1P05093 508 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 ENO2P09104 434 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms