RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 C17orf80Q9BSJ5 609 aa12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 CYTH3O43739 400 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 KCNA4P22459 653 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 SEMA3FQ13275 785 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 B4GALNT3Q6L9W6 998 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 TMEM87BQ96K49 555 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 PKNOX2Q96KN3 472 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 RC3H2Q9HBD1 1191 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 ERAP1Q9NZ08 941 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 ADGRA3Q8IWK6 1321 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 IGHDP01880 384 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 CYP21A2P08686 494 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 SLC35G1Q2M3R5 365 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 ODR4Q5SWX8 454 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 FCHSD1Q86WN1 690 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 HOMER1Q86YM7 354 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 CMTR2Q8IYT2 770 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 SEPT1Q8WYJ6 367 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 IFIH1Q9BYX4 1025 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 SMARCAD1Q9H4L7 1026 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 DNAH12Q6ZR08 3092 aa12.93□□□□□ -0.34
SMARCE1-214ENST00000578112 PRRC2BQ5JSZ5 2229 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 E7EWF7 191 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 BMPR1AP36894 532 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 PKN1Q16512 942 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 ADHFE1Q8IWW8 467 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 IGDCC4Q8TDY8 1250 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 LMBR1Q8WVP7 490 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 ZNF689Q96CS4 500 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 POTEB3A0JP26 581 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 hCG_1984214I3L0E3 225 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 DCXO43602 365 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 KCNA5P22460 613 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 CHMLP26374 656 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 ARHGAP4P98171 946 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 CTC1Q2NKJ3 1217 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 PPP1R18Q6NYC8 613 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 POTEBQ6S5H4 581 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 TSHZ1Q6ZSZ6 1077 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 CYFIP1Q7L576 1253 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 NME8Q8N427 588 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 ZNF713Q8N859 430 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 GLT8D2Q9H1C3 349 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 UBIAD1Q9Y5Z9 338 aa12.92□□□□□ -0.34
SMARCE1-214ENST00000578112 NFASCO94856 1347 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 KDM3AQ9Y4C1 1321 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 SGSM2O43147 1006 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 MMP1P03956 469 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 STAG3L1P0CL83 205 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 LIFRP42702 1097 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 SLC26A2P50443 739 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 SPRED2Q7Z698 418 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 MAP4K1Q92918 833 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 SETD4Q9NVD3 440 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 MEIS2O14770 477 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 KCNA2P16389 499 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 PPFIA1Q13136 1202 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 SMAD4Q13485 552 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 TCEAL5Q5H9L2 206 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 CASC1Q6TDU7 716 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 TMCO2Q7Z6W1 182 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 NPAS4Q8IUM7 802 aa12.91□□□□□ -0.34
SMARCE1-214ENST00000578112 MYO9BQ13459 2157 aa12.9□□□□□ -0.34
SMARCE1-214ENST00000578112 SMAD2Q15796 467 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-214ENST00000578112 IER5Q5VY09 327 aa12.9□□□□□ -0.34
SMARCE1-214ENST00000578112 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
SMARCE1-214ENST00000578112 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
SMARCE1-214ENST00000578112 LY9Q9HBG7 655 aa12.9□□□□□ -0.34
SMARCE1-214ENST00000578112 JADE2Q9NQC1 790 aa12.9□□□□□ -0.34
SMARCE1-214ENST00000578112 MTUS1Q9ULD2 1270 aa12.9□□□□□ -0.34
SMARCE1-214ENST00000578112 CTNNB1P35222 781 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 TCF7P36402 384 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 MRPS6P82932 125 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 UBE3AQ05086 875 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 ZP2Q05996 745 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 FBXO47Q5MNV8 452 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 FAM117BQ6P1L5 589 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 PLPPR4Q7Z2D5 763 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 PRRX2Q99811 253 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 COL1A2P08123 1366 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 KAT6AQ92794 2004 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 M0QZ92 97 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 ENPP3O14638 875 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 FOSP01100 380 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 CHRNA1P02708 482 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 LINC00271P0C7V0 271 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 IL9P15248 144 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 MCM5P33992 734 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 LPIN1Q14693 890 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 GRIK4Q16099 956 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 CSPP1Q1MSJ5 1256 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 PDE12Q6L8Q7 609 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms