RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 PHIPQ8WWQ0 1821 aa30.74■■■□□ 2.51
LIMD2-203ENST00000578067 KIF2AO00139 706 aaPredicted RBP30.74■■■□□ 2.51
LIMD2-203ENST00000578067 KIF20AO95235 890 aa30.74■■■□□ 2.51
LIMD2-203ENST00000578067 COG2Q14746 738 aa30.74■■■□□ 2.51
LIMD2-203ENST00000578067 TPH2Q8IWU9 490 aa30.74■■■□□ 2.51
LIMD2-203ENST00000578067 TAAR1Q96RJ0 339 aa30.74■■■□□ 2.51
LIMD2-203ENST00000578067 ADAMTS5Q9UNA0 930 aa30.74■■■□□ 2.51
LIMD2-203ENST00000578067 AFG3L2Q9Y4W6 797 aa30.74■■■□□ 2.51
LIMD2-203ENST00000578067 UBIAD1Q9Y5Z9 338 aa30.74■■■□□ 2.51
LIMD2-203ENST00000578067 B4DLN1 442 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 OAZ1P54368 228 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 PRKG1Q13976 671 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 EPHA7Q15375 998 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 RNF207Q6ZRF8 634 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 REPS2Q8NFH8 660 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 MYRIPQ8NFW9 859 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 REEP2Q9BRK0 252 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 FGFBP2Q9BYJ0 223 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 KCNH7Q9NS40 1196 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 UQCRHLA0A096LP55 91 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 UQCRHP07919 91 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 ZCWPW2Q504Y3 356 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 SYT17Q9BSW7 474 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 NOC4LQ9BVI4 516 aaKnown RBP30.73■■■□□ 2.51
LIMD2-203ENST00000578067 ZHX3Q9H4I2 956 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 PAXBP1Q9Y5B6 917 aa30.73■■■□□ 2.51
LIMD2-203ENST00000578067 RBBP6Q7Z6E9 1792 aaKnown RBP30.72■■■□□ 2.51
LIMD2-203ENST00000578067 ZSCAN12O43309 604 aa30.72■■■□□ 2.51
LIMD2-203ENST00000578067 TKFCQ3LXA3 575 aa30.72■■■□□ 2.51
LIMD2-203ENST00000578067 CATSPERGQ6ZRH7 1159 aa30.72■■■□□ 2.51
LIMD2-203ENST00000578067 DCPSQ96C86 337 aaKnown RBP30.72■■■□□ 2.51
LIMD2-203ENST00000578067 RNF146Q9NTX7 359 aa30.72■■■□□ 2.51
LIMD2-203ENST00000578067 MRPS9P82933 396 aaKnown RBP30.71■■■□□ 2.51
LIMD2-203ENST00000578067 LRRC55Q6ZSA7 311 aa30.71■■■□□ 2.51
LIMD2-203ENST00000578067 JADE2Q9NQC1 790 aa30.71■■■□□ 2.51
LIMD2-203ENST00000578067 RIPK3Q9Y572 518 aa30.71■■■□□ 2.51
LIMD2-203ENST00000578067 PGM5Q15124 567 aa30.71■■■□□ 2.51
LIMD2-203ENST00000578067 MIIPQ5JXC2 388 aa30.71■■■□□ 2.51
LIMD2-203ENST00000578067 NSMFQ6X4W1 530 aa30.71■■■□□ 2.51
LIMD2-203ENST00000578067 PIGOQ8TEQ8 1089 aa30.71■■■□□ 2.51
LIMD2-203ENST00000578067 EIF2AK2P19525 551 aaKnown RBP30.7■■■□□ 2.51
LIMD2-203ENST00000578067 TBC1D8BQ0IIM8 1120 aa30.7■■■□□ 2.51
LIMD2-203ENST00000578067 SCFD1Q8WVM8 642 aa30.7■■■□□ 2.51
LIMD2-203ENST00000578067 RUSC1Q9BVN2 902 aa30.7■■■□□ 2.51
LIMD2-203ENST00000578067 FECHP22830 423 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 MAP3K9P80192 1104 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 FKBP3Q00688 224 aaKnown RBP30.69■■■□□ 2.5
LIMD2-203ENST00000578067 RMDN3Q96TC7 470 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 PPP2R2CQ9Y2T4 447 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 RLFQ13129 1914 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 SH3D19Q5HYK7 790 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 SNRNP48Q6IEG0 339 aaKnown RBP30.69■■■□□ 2.5
LIMD2-203ENST00000578067 RINT1Q6NUQ1 792 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.69■■■□□ 2.5
LIMD2-203ENST00000578067 SULF1Q8IWU6 871 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 REXO1L1PQ8IX06 675 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 NEK9Q8TD19 979 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 ZNF592Q92610 1267 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 NACC1Q96RE7 527 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 AGO4Q9HCK5 861 aaKnown RBP30.69■■■□□ 2.5
LIMD2-203ENST00000578067 ABHD10Q9NUJ1 306 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 ZNF214Q9UL59 606 aaPredicted RBP30.69■■■□□ 2.5
LIMD2-203ENST00000578067 SNCAIPQ9Y6H5 919 aa30.69■■■□□ 2.5
LIMD2-203ENST00000578067 POLR2AP24928 1970 aaKnown RBP30.68■■■□□ 2.5
LIMD2-203ENST00000578067 TUBB4AP04350 444 aa30.68■■■□□ 2.5
LIMD2-203ENST00000578067 SFR1Q86XK3 245 aa30.68■■■□□ 2.5
LIMD2-203ENST00000578067 RBM46Q8TBY0 533 aaKnown RBP30.68■■■□□ 2.5
LIMD2-203ENST00000578067 PXMP2Q9NR77 195 aa30.68■■■□□ 2.5
LIMD2-203ENST00000578067 RNF225M0QZC1 329 aaPredicted RBP30.68■■■□□ 2.5
LIMD2-203ENST00000578067 DHX15O43143 795 aaKnown RBP30.68■■■□□ 2.5
LIMD2-203ENST00000578067 YBX3P16989 372 aaKnown RBP eCLIP30.68■■■□□ 2.5
LIMD2-203ENST00000578067 MTMR1Q13613 665 aa30.68■■■□□ 2.5
LIMD2-203ENST00000578067 BAATQ14032 418 aaPredicted RBP30.68■■■□□ 2.5
LIMD2-203ENST00000578067 FKBP15Q5T1M5 1219 aa30.68■■■□□ 2.5
LIMD2-203ENST00000578067 TOGARAM2Q6ZUX3 1019 aa30.68■■■□□ 2.5
LIMD2-203ENST00000578067 NELFCDQ8IXH7 590 aa30.68■■■□□ 2.5
LIMD2-203ENST00000578067 PDCD2LQ9BRP1 358 aa30.68■■■□□ 2.5
LIMD2-203ENST00000578067 PKD2L1Q9P0L9 805 aa30.68■■■□□ 2.5
LIMD2-203ENST00000578067 ATP2A1O14983 1001 aa30.67■■■□□ 2.5
LIMD2-203ENST00000578067 TBCAO75347 108 aaKnown RBP30.67■■■□□ 2.5
LIMD2-203ENST00000578067 VGLL4Q14135 290 aa30.67■■■□□ 2.5
LIMD2-203ENST00000578067 ARHGEF16Q5VV41 709 aa30.67■■■□□ 2.5
LIMD2-203ENST00000578067 C9orf131Q5VYM1 1079 aa30.67■■■□□ 2.5
LIMD2-203ENST00000578067 DLK2Q6UY11 383 aa30.67■■■□□ 2.5
LIMD2-203ENST00000578067 KCTD10Q9H3F6 313 aa30.67■■■□□ 2.5
LIMD2-203ENST00000578067 HOXC10Q9NYD6 342 aa30.67■■■□□ 2.5
LIMD2-203ENST00000578067 COL4A3BPQ9Y5P4 624 aa30.67■■■□□ 2.5
LIMD2-203ENST00000578067 SOWAHDA6NJG2 315 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 ADM5C9JUS6 153 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 DDX39AO00148 427 aaKnown RBP30.66■■■□□ 2.5
LIMD2-203ENST00000578067 TRAF5O00463 557 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 KRT9P35527 623 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 TMEM132BQ14DG7 1078 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 MAN2A1Q16706 1144 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 VWA3BQ502W6 1294 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 MIER3Q7Z3K6 550 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 NUP58Q9BVL2 599 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 MYPNQ86TC9 1320 aa30.66■■■□□ 2.5
LIMD2-203ENST00000578067 RIOK3O14730 519 aaKnown RBP30.66■■■□□ 2.5
LIMD2-203ENST00000578067 MYCLP12524 364 aaPredicted RBP30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms