RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 SNAP25P60880 206 aa15.96■□□□□ 0.15
SREBF1-217ENST00000577897 SF3A1Q15459 793 aaKnown RBP15.96■□□□□ 0.15
SREBF1-217ENST00000577897 BRDTQ58F21 947 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-217ENST00000577897 MUM1L1Q5H9M0 696 aa15.96■□□□□ 0.15
SREBF1-217ENST00000577897 SLFN13Q68D06 897 aa15.96■□□□□ 0.15
SREBF1-217ENST00000577897 NFRKBQ6P4R8 1299 aa15.96■□□□□ 0.15
SREBF1-217ENST00000577897 CNKSR3Q6P9H4 555 aa15.96■□□□□ 0.15
SREBF1-217ENST00000577897 CCDC155Q8N6L0 562 aa15.96■□□□□ 0.15
SREBF1-217ENST00000577897 KCNG4Q8TDN1 519 aa15.96■□□□□ 0.15
SREBF1-217ENST00000577897 LEO1Q8WVC0 666 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-217ENST00000577897 CYP39A1Q9NYL5 469 aa15.96■□□□□ 0.15
SREBF1-217ENST00000577897 MYH15Q9Y2K3 1946 aa15.96■□□□□ 0.14
SREBF1-217ENST00000577897 FDX1P10109 184 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 CDC27P30260 824 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 IRS1P35568 1242 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 FOSBP53539 338 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 NTRK3Q16288 839 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 PTGISQ16647 500 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 TKFCQ3LXA3 575 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 LRSAM1Q6UWE0 723 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 RAB11FIP4Q86YS3 637 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 FAM177A1Q8N128 213 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-217ENST00000577897 BICD2Q8TD16 824 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 AFAP1L1Q8TED9 768 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 CEP95Q96GE4 821 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 DDX19AQ9NUU7 478 aaKnown RBP15.95■□□□□ 0.14
SREBF1-217ENST00000577897 PRKAG3Q9UGI9 489 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 MUTYHQ9UIF7 546 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 RCOR1Q9UKL0 485 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 SCN10AQ9Y5Y9 1956 aa15.95■□□□□ 0.14
SREBF1-217ENST00000577897 TECTAO75443 2155 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 LCTP09848 1927 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 PRPF3O43395 683 aaKnown RBP15.94■□□□□ 0.14
SREBF1-217ENST00000577897 GFRA3O60609 400 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 YEATS4O95619 227 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 RXRAP19793 462 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 PTPN11Q06124 597 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-217ENST00000577897 STK38Q15208 465 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 PTPROQ16827 1216 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 TCTN1Q2MV58 587 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 TIGD5Q53EQ6 642 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 LRRC8DQ7L1W4 858 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 ADHFE1Q8IWW8 467 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 GMCL1P1Q8NEA9 526 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 CAGE1Q8TC20 777 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 MRPL38Q96DV4 380 aaKnown RBP15.94■□□□□ 0.14
SREBF1-217ENST00000577897 MYL10Q9BUA6 226 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 GRPEL1Q9HAV7 217 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 RTEL1Q9NZ71 1219 aa15.94■□□□□ 0.14
SREBF1-217ENST00000577897 TFIP11Q9UBB9 837 aaKnown RBP15.94■□□□□ 0.14
SREBF1-217ENST00000577897 IGKV6D-41A0A0C4DH26 115 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 TTLL1O95922 423 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 SELPP16109 830 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 ALDH5A1P51649 535 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-217ENST00000577897 GUCY1B3Q02153 619 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 GPNMBQ14956 572 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 TCEAL5Q5H9L2 206 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 IER5LQ5T953 404 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 CCDC73Q6ZRK6 1079 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 FAM160B2Q86V87 743 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 BANK1Q8NDB2 785 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 CHURC1Q8WUH1 139 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 PHKBQ93100 1093 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 PABPC5Q96DU9 382 aaKnown RBP15.93■□□□□ 0.14
SREBF1-217ENST00000577897 PRRX2Q99811 253 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 FOXP1Q9H334 677 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-217ENST00000577897 SENP2Q9HC62 589 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 FAM217BQ9NTX9 383 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-217ENST00000577897 CLDND1Q9NY35 253 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 MTMR4Q9NYA4 1195 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 FAM186AA6NE01 2351 aa15.93■□□□□ 0.14
SREBF1-217ENST00000577897 TRIP12Q14669 1992 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-217ENST00000577897 ABHD14A-ACY1A0A1B0GW23 586 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 NBNO60934 754 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 GADD45BO75293 160 aaPredicted RBP15.92■□□□□ 0.14
SREBF1-217ENST00000577897 TROAPQ12815 778 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 CLUL1Q15846 466 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 MYSM1Q5VVJ2 828 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 NEDD1Q8NHV4 660 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 MORC4Q8TE76 937 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 COPS5Q92905 334 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 MKL1Q969V6 931 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 TSPY26PQ9H489 355 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 FAM86C1Q9NVL1 165 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 TMEM63CQ9P1W3 806 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 ADD3Q9UEY8 706 aaKnown RBP15.92■□□□□ 0.14
SREBF1-217ENST00000577897 CCPG1Q9ULG6 757 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 CEP131Q9UPN4 1083 aa15.92■□□□□ 0.14
SREBF1-217ENST00000577897 MYO15AQ9UKN7 3530 aa15.91■□□□□ 0.14
SREBF1-217ENST00000577897 KPNA6O60684 536 aa15.91■□□□□ 0.14
SREBF1-217ENST00000577897 SLC1A4P43007 532 aa15.91■□□□□ 0.14
SREBF1-217ENST00000577897 ME1P48163 572 aa15.91■□□□□ 0.14
SREBF1-217ENST00000577897 IKBKEQ14164 716 aa15.91■□□□□ 0.14
SREBF1-217ENST00000577897 GDF6Q6KF10 455 aaPredicted RBP15.91■□□□□ 0.14
SREBF1-217ENST00000577897 TMTC3Q6ZXV5 915 aa15.91■□□□□ 0.14
SREBF1-217ENST00000577897 PNMA1Q8ND90 353 aa15.91■□□□□ 0.14
SREBF1-217ENST00000577897 VPS13AQ96RL7 3174 aa15.91■□□□□ 0.14
SREBF1-217ENST00000577897 WDR87Q6ZQQ6 2873 aa15.9■□□□□ 0.14
SREBF1-217ENST00000577897 MYH6P13533 1939 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms