RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 AZI2Q9H6S1 392 aa14.39□□□□□ -0.11
CDK5RAP3-203ENST00000577442 BCAS3Q9H6U6 928 aa14.39□□□□□ -0.11
CDK5RAP3-203ENST00000577442 PRDM5Q9NQX1 630 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-203ENST00000577442 PDLIM7Q9NR12 457 aa14.39□□□□□ -0.11
CDK5RAP3-203ENST00000577442 GRIN2DO15399 1336 aa14.39□□□□□ -0.11
CDK5RAP3-203ENST00000577442 EMSYQ7Z589 1322 aa14.39□□□□□ -0.11
CDK5RAP3-203ENST00000577442 H0YGN5 161 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 H3BRB1 525 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 DDX39AO00148 427 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 HAS3O00219 553 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 EDIL3O43854 480 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 LRCH2Q5VUJ6 765 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 NOSTRINQ8IVI9 506 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SMAP1Q8IYB5 467 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 C7orf31Q8N865 590 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 GLG1Q92896 1179 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SLC5A5Q92911 643 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 C16orf70Q9BSU1 422 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TEKT3Q9BXF9 490 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SMARCAD1Q9H4L7 1026 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TUT1Q9H6E5 874 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TMEM39AQ9NV64 488 aa14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 ZMYND8Q9ULU4 1186 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 NOL7Q9UMY1 257 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-203ENST00000577442 GSTTP1A0A1W2PQM5 241 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 FAM205CA6NFA0 338 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 WDR64B1ANS9 1081 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 KIAA0355O15063 1070 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TBX3O15119 743 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 DHX15O43143 795 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 MARCH6O60337 910 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TRAPPC10P48553 1259 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 ORC2Q13416 577 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 EARS2Q5JPH6 523 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 FAM160B1Q5W0V3 765 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 LARP1BQ659C4 914 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 MIS18BP1Q6P0N0 1132 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 ETNPPLQ8TBG4 499 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TNPO1Q92973 898 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 FAM20AQ96MK3 541 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 LBHD1Q9BQE6 289 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 ERAP1Q9NZ08 941 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 GTF2IRD1Q9UHL9 959 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 NOD1Q9Y239 953 aa14.37□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TRIP12Q14669 1992 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 BACH1O14867 736 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SLC37A4O43826 429 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 B4GALT4O60513 344 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 LGR5O75473 907 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 BAG4O95429 457 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 CCNE2O96020 404 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 CD4P01730 458 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 U2AF2P26368 475 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SFNP31947 248 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SLC26A2P50443 739 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 JAK3P52333 1124 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 FAAP100Q0VG06 881 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 MCTP1Q6DN14 999 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SLFN12Q8IYM2 578 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 CCDC155Q8N6L0 562 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 RDM1Q8NG50 284 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 KCNMB3Q9NPA1 279 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TBX21Q9UL17 535 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 PCDHA10Q9Y5I2 948 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 WDR81Q562E7 1941 aa14.36□□□□□ -0.11
CDK5RAP3-203ENST00000577442 NEMFO60524 1076 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 PSMD10O75832 226 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 ATG7O95352 703 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 PSAPP07602 524 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 GNAT1P11488 350 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 RAG1P15918 1043 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SYN1P17600 705 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 STAT5BP51692 787 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 ABHD15Q6UXT9 468 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 PLPPR4Q7Z2D5 763 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 POTEDQ86YR6 584 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 UIMC1Q96RL1 719 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TRPV6Q9H1D0 765 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TRMT13Q9NUP7 481 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 HDAC6Q9UBN7 1215 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TELO2Q9Y4R8 837 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SAMM50Q9Y512 469 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 LTBP2Q14767 1821 aa14.35□□□□□ -0.11
CDK5RAP3-203ENST00000577442 C17orf102A2RUQ5 167 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 KIF28PB7ZC32 967 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SMIM10L2AP0DMW4 78 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 SMIM10L2BP0DMW5 78 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 ATP2B1P20020 1258 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 BFSP2Q13515 415 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 CALCRLQ16602 461 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 PTGISQ16647 500 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 TTC38Q5R3I4 469 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 MIER3Q7Z3K6 550 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 AFAP1L1Q8TED9 768 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 ZNF302Q9NR11 478 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 DISC1Q9NRI5 854 aa14.34□□□□□ -0.11
CDK5RAP3-203ENST00000577442 IGKV6D-21A0A0A0MT36 114 aa14.33□□□□□ -0.12
CDK5RAP3-203ENST00000577442 TRIM43BA6NCK2 446 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms