RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 TNPO1Q92973 898 aaKnown RBP15.42■□□□□ 0.06
CIITA-210ENST00000575513 LENG9Q96B70 501 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 BRMS1Q9HCU9 246 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 ERAP1Q9NZ08 941 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 PKD2L1Q9P0L9 805 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 NOD1Q9Y239 953 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 EMSYQ7Z589 1322 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 PARNO95453 639 aaKnown RBP15.41■□□□□ 0.06
CIITA-210ENST00000575513 CYP2C9P11712 490 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 CYP2C18P33260 490 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 SLC26A2P50443 739 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 ACTR2P61160 394 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 SP4Q02446 784 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 PTK7Q13308 1070 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 PRR16Q569H4 304 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 PLPPR4Q7Z2D5 763 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 RPUSD2Q8IZ73 545 aaKnown RBP15.41■□□□□ 0.06
CIITA-210ENST00000575513 RETREG2Q8NC44 543 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 MBOAT7Q96N66 472 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 CTAGE1Q96RT6 745 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 RIT2Q99578 217 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 NAP1L4Q99733 375 aaKnown RBP15.41■□□□□ 0.06
CIITA-210ENST00000575513 ZNF577Q9BSK1 485 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 PPP1R12CQ9BZL4 782 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 TELO2Q9Y4R8 837 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 MYH7BA7E2Y1 1941 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 NRCAMQ92823 1304 aa15.41■□□□□ 0.06
CIITA-210ENST00000575513 IGKV6D-21A0A0A0MT36 114 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 CCDC194A0A1B0GVG4 234 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 C17orf102A2RUQ5 167 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 JAK2O60674 1132 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 PFKMP08237 780 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 SMIM10L2AP0DMW4 78 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 SMIM10L2BP0DMW5 78 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 CSF2RAP15509 400 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 RFC2P35250 354 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 FXR1P51114 621 aaKnown RBP eCLIP15.4■□□□□ 0.06
CIITA-210ENST00000575513 TRIM29Q14134 588 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 UTP14CQ5TAP6 766 aaKnown RBP15.4■□□□□ 0.06
CIITA-210ENST00000575513 PPP4R3AQ6IN85 833 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 ZNF746Q6NUN9 644 aaPredicted RBP15.4■□□□□ 0.06
CIITA-210ENST00000575513 CCDC83Q8IWF9 413 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 SMAP1Q8IYB5 467 aaPredicted RBP15.4■□□□□ 0.06
CIITA-210ENST00000575513 AFAP1L1Q8TED9 768 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 GLG1Q92896 1179 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 RNPEPQ9H4A4 650 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 AZI2Q9H6S1 392 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 IL23AQ9NPF7 189 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 LTBP2Q14767 1821 aa15.4■□□□□ 0.06
CIITA-210ENST00000575513 MMP1P03956 469 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 GCFC2P16383 781 aaKnown RBP15.39■□□□□ 0.05
CIITA-210ENST00000575513 KRT2P35908 639 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 EPHB4P54760 987 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 ADAM17P78536 824 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 KRT76Q01546 638 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 SHHQ15465 462 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 GPR153Q6NV75 609 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 PSRC1Q6PGN9 363 aaPredicted RBP15.39■□□□□ 0.05
CIITA-210ENST00000575513 ABHD15Q6UXT9 468 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 SERINC5Q86VE9 423 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 SLC5A5Q92911 643 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 PCYT2Q99447 389 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 WNT8AQ9H1J5 351 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 GJB4Q9NTQ9 266 aa15.39■□□□□ 0.05
CIITA-210ENST00000575513 MSH4O15457 936 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 CAND2O75155 1236 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 CCNE2O96020 404 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 IQCF3P0C7M6 154 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 STAT5BP51692 787 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 INF2Q27J81 1249 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 KRT40Q6A162 431 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 MIS18BP1Q6P0N0 1132 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 C16orf59Q7L2K0 433 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 NEK8Q86SG6 692 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 TRIM50Q86XT4 487 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 OXER1Q8TDS5 423 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 PPP1R13LQ8WUF5 828 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 TNFRSF25Q93038 417 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 ATP6V0A1Q93050 837 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 PCDH10Q9P2E7 1040 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 TCEAL9Q9UHQ7 104 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 UMODL1Q5DID0 1318 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 LAMA3Q16787 3333 aa15.38■□□□□ 0.05
CIITA-210ENST00000575513 RRN3P2A6NIE6 340 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 RPLP2P05387 115 aaKnown RBP15.37■□□□□ 0.05
CIITA-210ENST00000575513 SELPP16109 830 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 CCL23P55773 120 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 HIC1Q14526 733 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 SAFBQ15424 915 aaKnown RBP eCLIP15.37■□□□□ 0.05
CIITA-210ENST00000575513 TRIM71Q2Q1W2 868 aaKnown RBP15.37■□□□□ 0.05
CIITA-210ENST00000575513 TMEM240Q5SV17 173 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 C9orf50Q5SZB4 431 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 RASIP1Q5U651 963 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 FAM160B1Q5W0V3 765 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 PIK3AP1Q6ZUJ8 805 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 RPAINQ86UA6 219 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 RDM1Q8NG50 284 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 DHX38Q92620 1227 aaKnown RBP15.37■□□□□ 0.05
CIITA-210ENST00000575513 SETD4Q9NVD3 440 aa15.37■□□□□ 0.05
CIITA-210ENST00000575513 DDX25Q9UHL0 483 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms