RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 ZKSCAN1P17029 563 aaPredicted RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 KCNA3P22001 575 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 LTKP29376 864 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 ADARP55265 1226 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 MECOMQ03112 1051 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CEBPZQ03701 1054 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 ST3GAL1Q11201 340 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 COL19A1Q14993 1142 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CCDC14Q49A88 953 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 IFFO2Q5TF58 517 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SLC2A7Q6PXP3 512 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CLEC4GQ6UXB4 293 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 DAAM2Q86T65 1068 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 PASD1Q8IV76 773 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SCUBE1Q8IWY4 988 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SLC7A5P1Q8MH63 180 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SH2D3CQ8N5H7 860 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 CCDC110Q8TBZ0 833 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 ACMSDQ8TDX5 336 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 STK32AQ8WU08 396 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 SKA1Q96BD8 255 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 LSG1Q9H089 658 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 EPB41L1Q9H4G0 881 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 TMBIM4Q9HC24 238 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 FAIMQ9NVQ4 179 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 PTTG2Q9NZH5 202 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 STIM2Q9P246 746 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 TUBE1Q9UJT0 475 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 ZNF180Q9UJW8 692 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 FAM32AQ9Y421 112 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 PCDHB2Q9Y5E7 798 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 RIMS2Q9UQ26 1411 aa8.68□□□□□ -1.02
TOM1L1-220ENST00000575333 ARHGAP23Q9P227 1491 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 SMIM31A0A1B0GVY4 71 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 KANSL1LA0AUZ9 987 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 ATP1A3P13637 1013 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 HALP42357 657 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 CACNA2D1P54289 1103 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 NCALDP61601 193 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 TRIM14Q14142 442 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 PARP6Q2NL67 630 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 TRIM71Q2Q1W2 868 aaKnown RBP8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 BOLA3Q53S33 107 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 SPDYCQ5MJ68 293 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 FOXB2Q5VYV0 432 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 FAM173BQ6P4H8 233 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 CCDC174Q6PII3 467 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 TRIM50Q86XT4 487 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 RAB11FIP4Q86YS3 637 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 CROCCP3Q8IVE0 287 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 IFT20Q8IY31 132 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 ASAP3Q8TDY4 903 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 DPF2Q92785 391 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 KLHL29Q96CT2 875 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 CLIP3Q96DZ5 547 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 MMS19Q96T76 1030 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 PFDN4Q9NQP4 134 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 EURLQ9NYK6 297 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 BTBD7Q9P203 1132 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 INTUQ9ULD6 942 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 PPME1Q9Y570 386 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 ITIH6Q6UXX5 1313 aa8.67□□□□□ -1.02
TOM1L1-220ENST00000575333 SOWAHDA6NJG2 315 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ZNF233A6NK53 670 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 GCOM1H8Y6P7 765 aaPredicted RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ATP2C2O75185 946 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 TJP3O95049 919 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 GNA14O95837 355 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 ZFYP08048 801 aaPredicted RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 SLC10A3P09131 477 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 MYZAPP0CAP1 466 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 CD46P15529 392 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 RPL17P18621 184 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 PRKAR2BP31323 418 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 RGS2P41220 211 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 PPP2R2AP63151 447 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 CTAG1AP78358 180 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 OCRLQ01968 901 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 SEPT6Q14141 434 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 SEPT7Q16181 437 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 MUM1Q2TAK8 710 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 TCERG1LQ5VWI1 586 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 KCTD16Q68DU8 428 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 RAD9BQ6WBX8 426 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 UNC13DQ70J99 1090 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 TSEN2Q8NCE0 465 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 KCNG4Q8TDN1 519 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 FBXO41Q8TF61 875 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 USP6NLQ92738 828 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 RILPL2Q969X0 211 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 LLPHQ9BRT6 129 aaKnown RBP8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 FAM114A2Q9NRY5 505 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 CYP39A1Q9NYL5 469 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 STOML1Q9UBI4 398 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 WWC3Q9ULE0 1092 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 TIMM22Q9Y584 194 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 TMEM94Q12767 1356 aa8.66□□□□□ -1.02
TOM1L1-220ENST00000575333 NEURL4Q96JN8 1562 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms