RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 FAM109BQ6ICB4 259 aaPredicted RBP9.91□□□□□ -0.82
SMG6-216ENST00000575176 CCDC148Q8NFR7 591 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.91□□□□□ -0.828e-7■■■■■ 32.7
SMG6-216ENST00000575176 C22orf23Q9BZE7 217 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 PPP1R12CQ9BZL4 782 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 GLT8D2Q9H1C3 349 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 HIPK3Q9H422 1215 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 TMEM39AQ9NV64 488 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 MUC3AQ02505 3323 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 IGSF9BQ9UPX0 1349 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 CYP3A7-CYP3A51PA0A087WV96 503 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 ZBTB42B2RXF5 422 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 PITPNM1O00562 1244 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 SLC37A4O43826 429 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 TDP2O95551 362 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 CYP3A7P24462 503 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 TCF7P36402 384 aaPredicted RBP9.9□□□□□ -0.82
SMG6-216ENST00000575176 FPGSQ05932 587 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 SSRP1Q08945 709 aaKnown RBP9.9□□□□□ -0.82
SMG6-216ENST00000575176 ANKRD1Q15327 319 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 MARCH8Q5T0T0 291 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 NLRX1Q86UT6 975 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 SERINC5Q86VE9 423 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 BLIDQ8IZY5 108 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 ETNPPLQ8TBG4 499 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 SCLYQ96I15 445 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 UBE2OQ9C0C9 1292 aaKnown RBP9.9□□□□□ -0.82
SMG6-216ENST00000575176 SLKQ9H2G2 1235 aaPredicted RBP9.9□□□□□ -0.82
SMG6-216ENST00000575176 C6orf50Q9HD87 102 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 PKD2L1Q9P0L9 805 aa9.9□□□□□ -0.82
SMG6-216ENST00000575176 CXXC1Q9P0U4 656 aaPredicted RBP9.9□□□□□ -0.82
SMG6-216ENST00000575176 RALGAPA2Q2PPJ7 1873 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 MBLAC1A4D2B0 266 aaPredicted RBP9.89□□□□□ -0.83
SMG6-216ENST00000575176 H3BRB1 525 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 MSH4O15457 936 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 MAFGO15525 162 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 RAG1P15918 1043 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 ATP4AP20648 1035 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 GNA11P29992 359 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 ACTR2P61160 394 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 NR5A1Q13285 461 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 ABHD15Q6UXT9 468 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 CCDC60Q8IWA6 550 aaPredicted RBP9.89□□□□□ -0.83
SMG6-216ENST00000575176 TRIM22Q8IYM9 498 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 TBCKQ8TEA7 893 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 CCDC12Q8WUD4 166 aaPredicted RBP9.89□□□□□ -0.83
SMG6-216ENST00000575176 SLC5A5Q92911 643 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 GJA10Q969M2 543 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 CDHR1Q96JP9 859 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 ALG1Q9BT22 464 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 KATNAL1Q9BW62 490 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 RNPEPQ9H4A4 650 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 TUT1Q9H6E5 874 aaKnown RBP9.89□□□□□ -0.83
SMG6-216ENST00000575176 MLXIPQ9HAP2 919 aa9.89□□□□□ -0.83
SMG6-216ENST00000575176 JPH1Q9HDC5 661 aaPredicted RBP9.89□□□□□ -0.83
SMG6-216ENST00000575176 ORC3Q9UBD5 711 aaPredicted RBP9.89□□□□□ -0.83
SMG6-216ENST00000575176 IPO5O00410 1097 aaKnown RBP9.88□□□□□ -0.83
SMG6-216ENST00000575176 CPLX1O14810 134 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 TLR3O15455 904 aaKnown RBP9.88□□□□□ -0.83
SMG6-216ENST00000575176 TREHO43280 583 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 NBNO60934 754 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 CXCL10P02778 98 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 CCL23P55773 120 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 SETQ01105 290 aaPredicted RBP9.88□□□□□ -0.83
SMG6-216ENST00000575176 SP4Q02446 784 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 SPIRE1Q08AE8 756 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 PTGISQ16647 500 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 Q4G0T1 1027 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 BRDTQ58F21 947 aaPredicted RBP9.88□□□□□ -0.83
SMG6-216ENST00000575176 MOXD1Q6UVY6 613 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 RUFY4Q6ZNE9 571 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 AFAP1L1Q8TED9 768 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 ZBTB10Q96DT7 871 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 UIMC1Q96RL1 719 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 BACH2Q9BYV9 841 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 KCNMB3Q9NPA1 279 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 IL23AQ9NPF7 189 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 SLC9A2Q9UBY0 812 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 VAV3Q9UKW4 847 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 LIMCH1Q9UPQ0 1083 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 A0A0C4DFX4 3053 aa9.88□□□□□ -0.83
SMG6-216ENST00000575176 ZNF862O60290 1169 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 PSMD10O75832 226 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 CDKL5O76039 1030 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 STBD1O95210 358 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 MMP1P03956 469 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 IQCF3P0C7M6 154 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 SUPT20HL2P0C7V6 817 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 ACRP10323 421 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 CKBP12277 381 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 USP11P51784 963 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 MGAT3Q09327 533 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 PTK7Q13308 1070 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 RABEP1Q15276 862 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 UGCGQ16739 394 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 INF2Q27J81 1249 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 FAM47CQ5HY64 1035 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms