RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	LY6K	Q17RY6	165 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	CELF3	Q5SZQ8	465 aa	Known RBP	13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	RRAGB	Q5VZM2	374 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	METTL7B	Q6UX53	244 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	PXYLP1	Q8TE99	480 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	CDK5RAP3	Q96JB5	506 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	ANP32E	Q9BTT0	268 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	MAGEF1	Q9HAY2	307 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	JPH1	Q9HDC5	661 aa	Predicted RBP	13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	PDGFC	Q9NRA1	345 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	PKD2L1	Q9P0L9	805 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	STK17A	Q9UEE5	414 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	PCDHA10	Q9Y5I2	948 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	MCM3AP	O60318	1980 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116		A0A087X0B3	334 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	DDX39A	O00148	427 aa	Known RBP	13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	DKC1	O60832	514 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	FARP2	O94887	1054 aa	Predicted RBP	13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	LETM1	O95202	739 aa	Predicted RBP	13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	ARIH2	O95376	493 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	GGPS1	O95749	300 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	CCNE2	O96020	404 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	P4HB	P07237	508 aa	Known RBP	13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	PSAP	P07602	524 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	SLFN14	P0C7P3	912 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	SPATA31C1	P0DKV0	1188 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	CAP1	Q01518	475 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	GRB10	Q13322	594 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	LAMC2	Q13753	1193 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	KARS	Q15046	597 aa	Known RBP	13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	E2F4	Q16254	413 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	LONRF3	Q496Y0	759 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	DUSP28	Q4G0W2	176 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	TMEM119	Q4V9L6	283 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	KRBA2	Q6ZNG9	492 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	CYFIP1	Q7L576	1253 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	CATSPER3	Q86XQ3	398 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	DHX37	Q8IY37	1157 aa	Known RBP	13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	CEP57L1	Q8IYX8	460 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	PDILT	Q8N807	584 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	RASSF8	Q8NHQ8	419 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	EMID1	Q96A84	441 aa	Predicted RBP	13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	PANK2	Q9BZ23	570 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	CLSTN2	Q9H4D0	955 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	MLXIP	Q9HAP2	919 aa		13.35	□□□□□ -0.27
PRPF8-212	ENST00000575116	ZSWIM8	A7E2V4	1837 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	CHMP2A	O43633	222 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	MED24	O75448	989 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	SLITRK3	O94933	977 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	LYPLA2	O95372	231 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	GH1	P01241	217 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	XRCC6	P12956	609 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	PLCG1	P19174	1290 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	CYP2C19	P33261	490 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	STAT6	P42226	847 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	ACTR2	P61160	394 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	CCDC183	Q5T5S1	534 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	MIS18BP1	Q6P0N0	1132 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	ABHD15	Q6UXT9	468 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	CNNM3	Q8NE01	707 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	SEPT1	Q8WYJ6	367 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	DHX58	Q96C10	678 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	PNMA5	Q96PV4	448 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	NUP62CL	Q9H1M0	184 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	SERTAD1	Q9UHV2	236 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	HOOK1	Q9UJC3	728 aa	Known RBP	13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	FAM184B	Q9ULE4	1060 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116		Q9Y3F1	56 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	SAMM50	Q9Y512	469 aa		13.34	□□□□□ -0.27
PRPF8-212	ENST00000575116	IGKV6D-21	A0A0A0MT36	114 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	ACTN4	O43707	911 aa	Known RBP	13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	ADCY3	O60266	1144 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	ADCYAP1R1	P41586	468 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	QARS	P47897	775 aa	Known RBP	13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	PSMC5	P62195	406 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	TNFAIP2	Q03169	654 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	CCDC144B	Q3MJ40	725 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	CAVIN1	Q6NZI2	390 aa	Known RBP	13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	RAET1E	Q8TD07	263 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	TRIB2	Q92519	343 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	DYDC2	Q96IM9	177 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	NACC1	Q96RE7	527 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	LRRC27	Q9C0I9	530 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	BCAS3	Q9H6U6	928 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	ZSWIM4	Q9H7M6	989 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	RGL1	Q9NZL6	768 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	TMEM63C	Q9P1W3	806 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	KIAA1024	Q9UPX6	916 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	DNM3	Q9UQ16	869 aa		13.33	□□□□□ -0.28
PRPF8-212	ENST00000575116	GSTTP1	A0A1W2PQM5	241 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	HMGCR	P04035	888 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	MYL1	P05976	194 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	SUPT20HL2	P0C7V6	817 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	CYBA	P13498	195 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	SMPD1	P17405	629 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	MDM2	Q00987	491 aa	Predicted RBP	13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	AMPD3	Q01432	767 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms