RNA–Protein interactions for RNA: ENST00000574703.5

LITAF-214, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-214ENST00000574703 GJB2P29033 226 aa18.33■□□□□ 0.52
LITAF-214ENST00000574703 ACTR2P61160 394 aa18.33■□□□□ 0.52
LITAF-214ENST00000574703 EARS2Q5JPH6 523 aaKnown RBP18.33■□□□□ 0.52
LITAF-214ENST00000574703 UTP14CQ5TAP6 766 aaKnown RBP18.33■□□□□ 0.52
LITAF-214ENST00000574703 SH3RF1Q7Z6J0 888 aa18.33■□□□□ 0.52
LITAF-214ENST00000574703 TRIM43Q96BQ3 446 aaPredicted RBP18.33■□□□□ 0.52
LITAF-214ENST00000574703 RIT2Q99578 217 aa18.33■□□□□ 0.52
LITAF-214ENST00000574703 TRPV6Q9H1D0 765 aa18.33■□□□□ 0.52
LITAF-214ENST00000574703 FOXP1Q9H334 677 aaPredicted RBP18.33■□□□□ 0.52
LITAF-214ENST00000574703 TCEAL9Q9UHQ7 104 aa18.33■□□□□ 0.52
LITAF-214ENST00000574703 SMC3Q9UQE7 1217 aa18.33■□□□□ 0.52
LITAF-214ENST00000574703 CEP290O15078 2479 aa18.33■□□□□ 0.52
LITAF-214ENST00000574703 CCNT1O60563 726 aaKnown RBP18.32■□□□□ 0.52
LITAF-214ENST00000574703 ATG7O95352 703 aa18.32■□□□□ 0.52
LITAF-214ENST00000574703 UIMC1Q96RL1 719 aa18.32■□□□□ 0.52
LITAF-214ENST00000574703 LBHD1Q9BQE6 289 aaPredicted RBP18.32■□□□□ 0.52
LITAF-214ENST00000574703 SMARCAD1Q9H4L7 1026 aa18.32■□□□□ 0.52
LITAF-214ENST00000574703 TBX21Q9UL17 535 aa18.32■□□□□ 0.52
LITAF-214ENST00000574703 EMSYQ7Z589 1322 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 FAM205CA6NFA0 338 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 DDX39AO00148 427 aaKnown RBP18.31■□□□□ 0.52
LITAF-214ENST00000574703 CCNE2O96020 404 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 RAG1P15918 1043 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 KRT76Q01546 638 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 ZNF746Q6NUN9 644 aaPredicted RBP18.31■□□□□ 0.52
LITAF-214ENST00000574703 TRIM50Q86XT4 487 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 PPP1R13LQ8WUF5 828 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 GLG1Q92896 1179 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 SLC5A5Q92911 643 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 SNX21Q969T3 373 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 AZI2Q9H6S1 392 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 TRMT13Q9NUP7 481 aaKnown RBP18.31■□□□□ 0.52
LITAF-214ENST00000574703 ERAP1Q9NZ08 941 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 HDAC6Q9UBN7 1215 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 GTF2IRD1Q9UHL9 959 aa18.31■□□□□ 0.52
LITAF-214ENST00000574703 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
LITAF-214ENST00000574703 LGR5O75473 907 aa18.3■□□□□ 0.52
LITAF-214ENST00000574703 TIMP1P01033 207 aa18.3■□□□□ 0.52
LITAF-214ENST00000574703 GNL2Q13823 731 aaKnown RBP18.3■□□□□ 0.52
LITAF-214ENST00000574703 GDF6Q6KF10 455 aaPredicted RBP18.3■□□□□ 0.52
LITAF-214ENST00000574703 MIS18BP1Q6P0N0 1132 aa18.3■□□□□ 0.52
LITAF-214ENST00000574703 ABHD15Q6UXT9 468 aa18.3■□□□□ 0.52
LITAF-214ENST00000574703 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
LITAF-214ENST00000574703 TEKT3Q9BXF9 490 aa18.3■□□□□ 0.52
LITAF-214ENST00000574703 NOD1Q9Y239 953 aa18.3■□□□□ 0.52
LITAF-214ENST00000574703 IGKV6D-21A0A0A0MT36 114 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 SLC37A4O43826 429 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 GAS7O60861 476 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 MAGEA10P43363 369 aaPredicted RBP18.29■□□□□ 0.52
LITAF-214ENST00000574703 PTGISQ16647 500 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 LRCH2Q5VUJ6 765 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 PLPPR4Q7Z2D5 763 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 ETNPPLQ8TBG4 499 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 INTS4Q96HW7 963 aaKnown RBP18.29■□□□□ 0.52
LITAF-214ENST00000574703 FAM20AQ96MK3 541 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 PCYT2Q99447 389 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 GDF15Q99988 308 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 HIPK3Q9H422 1215 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 RNPEPQ9H4A4 650 aa18.29■□□□□ 0.52
LITAF-214ENST00000574703 C17orf102A2RUQ5 167 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 H3BQV1 296 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 TBX3O15119 743 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 PSMD10O75832 226 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 SMIM10L2AP0DMW4 78 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 SMIM10L2BP0DMW5 78 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 GNAT1P11488 350 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 ITGB8P26012 769 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 U2AF2P26368 475 aaKnown RBP eCLIP18.28■□□□□ 0.52
LITAF-214ENST00000574703 SLC26A2P50443 739 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 STAT5BP51692 787 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 MDM2Q00987 491 aaPredicted RBP18.28■□□□□ 0.52
LITAF-214ENST00000574703 FAM160B1Q5W0V3 765 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 CHRDL2Q6WN34 429 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 NOSTRINQ8IVI9 506 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 BADQ92934 168 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 TNPO1Q92973 898 aaKnown RBP18.28■□□□□ 0.52
LITAF-214ENST00000574703 KCNMB3Q9NPA1 279 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 PCDHA10Q9Y5I2 948 aa18.28■□□□□ 0.52
LITAF-214ENST00000574703 WDR64B1ANS9 1081 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 BACH1O14867 736 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 MARCH6O60337 910 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 PSAPP07602 524 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 CYP2C9P11712 490 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 MARK3P27448 753 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 HOXC8P31273 242 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 SFNP31947 248 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 BMP8BP34820 402 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 LARP1BQ659C4 914 aaKnown RBP18.27■□□□□ 0.52
LITAF-214ENST00000574703 MFSD5Q6N075 450 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 AFAP1L1Q8TED9 768 aa18.27■□□□□ 0.52
LITAF-214ENST00000574703 NOC4LQ9BVI4 516 aaKnown RBP18.27■□□□□ 0.52
LITAF-214ENST00000574703 NRCAMQ92823 1304 aa18.26■□□□□ 0.51
LITAF-214ENST00000574703 BAG4O95429 457 aaKnown RBP18.26■□□□□ 0.51
LITAF-214ENST00000574703 JAK3P52333 1124 aa18.26■□□□□ 0.51
LITAF-214ENST00000574703 PTK7Q13308 1070 aa18.26■□□□□ 0.51
LITAF-214ENST00000574703 SWSAP1Q6NVH7 229 aa18.26■□□□□ 0.51
LITAF-214ENST00000574703 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
LITAF-214ENST00000574703 HSCBQ8IWL3 235 aa18.26■□□□□ 0.51
LITAF-214ENST00000574703 SLFN12Q8IYM2 578 aa18.26■□□□□ 0.51
LITAF-214ENST00000574703 RDM1Q8NG50 284 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms