RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 KRT40Q6A162 431 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 WWC2Q6AWC2 1192 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 RASEFQ8IZ41 740 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 BRPF3Q9ULD4 1205 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 NAP1L2Q9ULW6 460 aaPredicted RBP24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 CNTNAP5Q8WYK1 1306 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 TCF7P36402 384 aaPredicted RBP24.22■■□□□ 1.47
CHRNB1-206ENST00000574054 KRT32Q14532 448 aa24.22■■□□□ 1.47
CHRNB1-206ENST00000574054 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.22■■□□□ 1.47
CHRNB1-206ENST00000574054 LMBR1Q8WVP7 490 aa24.22■■□□□ 1.47
CHRNB1-206ENST00000574054 MTUS1Q9ULD2 1270 aa24.22■■□□□ 1.47
CHRNB1-206ENST00000574054 UBIAD1Q9Y5Z9 338 aa24.22■■□□□ 1.47
CHRNB1-206ENST00000574054 GOLGA8AA7E2F4 631 aa24.21■■□□□ 1.47
CHRNB1-206ENST00000574054 GOLGA8BA8MQT2 603 aa24.21■■□□□ 1.47
CHRNB1-206ENST00000574054 CAND2O75155 1236 aa24.21■■□□□ 1.47
CHRNB1-206ENST00000574054 AMHP03971 560 aa24.21■■□□□ 1.47
CHRNB1-206ENST00000574054 GRB10Q13322 594 aa24.21■■□□□ 1.47
CHRNB1-206ENST00000574054 MYOCDQ8IZQ8 938 aa24.21■■□□□ 1.47
CHRNB1-206ENST00000574054 SEPT1Q8WYJ6 367 aa24.21■■□□□ 1.47
CHRNB1-206ENST00000574054 XIRP2A4UGR9 3374 aa24.21■■□□□ 1.47
CHRNB1-206ENST00000574054 KLF18A0A0U1RQI7 1052 aa24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 POU3F3P20264 500 aaPredicted RBP24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 MARK3P27448 753 aa24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 FGD1P98174 961 aa24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 TSGA10IPQ3SY00 556 aa24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 PLEKHG4Q58EX7 1191 aa24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 GDPD5Q8WTR4 605 aa24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 SEPT8Q92599 483 aa24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 GLG1Q92896 1179 aa24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 JADE2Q9NQC1 790 aa24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 V9GY48 417 aaPredicted RBP24.2■■□□□ 1.46
CHRNB1-206ENST00000574054 NRCAMQ92823 1304 aa24.19■■□□□ 1.46
CHRNB1-206ENST00000574054 GSTTP1A0A1W2PQM5 241 aa24.19■■□□□ 1.46
CHRNB1-206ENST00000574054 ADCY7P51828 1080 aa24.19■■□□□ 1.46
CHRNB1-206ENST00000574054 PPFIA1Q13136 1202 aa24.19■■□□□ 1.46
CHRNB1-206ENST00000574054 PPP1R18Q6NYC8 613 aa24.19■■□□□ 1.46
CHRNB1-206ENST00000574054 PGBD1Q96JS3 809 aa24.19■■□□□ 1.46
CHRNB1-206ENST00000574054 RIC8AQ9NPQ8 531 aa24.19■■□□□ 1.46
CHRNB1-206ENST00000574054 LINC01553A4QN01 128 aa24.18■■□□□ 1.46
CHRNB1-206ENST00000574054 ADAM17P78536 824 aa24.18■■□□□ 1.46
CHRNB1-206ENST00000574054 FUT2Q10981 343 aa24.18■■□□□ 1.46
CHRNB1-206ENST00000574054 TYW1BQ6NUM6 668 aa24.18■■□□□ 1.46
CHRNB1-206ENST00000574054 ADAMTS19Q8TE59 1207 aa24.18■■□□□ 1.46
CHRNB1-206ENST00000574054 TGS1Q96RS0 853 aaKnown RBP24.18■■□□□ 1.46
CHRNB1-206ENST00000574054 OSBPL7Q9BZF2 842 aa24.18■■□□□ 1.46
CHRNB1-206ENST00000574054 ERAP1Q9NZ08 941 aa24.18■■□□□ 1.46
CHRNB1-206ENST00000574054 STXBP3O00186 592 aa24.17■■□□□ 1.46
CHRNB1-206ENST00000574054 HMGB1P09429 215 aaKnown RBP24.17■■□□□ 1.46
CHRNB1-206ENST00000574054 TFF2Q03403 129 aa24.17■■□□□ 1.46
CHRNB1-206ENST00000574054 RUFY4Q6ZNE9 571 aa24.17■■□□□ 1.46
CHRNB1-206ENST00000574054 JPH1Q9HDC5 661 aaPredicted RBP24.17■■□□□ 1.46
CHRNB1-206ENST00000574054 INSL6Q9Y581 213 aa24.17■■□□□ 1.46
CHRNB1-206ENST00000574054 BDP1A6H8Y1 2624 aa24.17■■□□□ 1.46
CHRNB1-206ENST00000574054 MUC3AQ02505 3323 aa24.17■■□□□ 1.46
CHRNB1-206ENST00000574054 NCOR1O75376 2440 aa24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 TNFRSF10AO00220 468 aa24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 MAFGO15525 162 aa24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 LPXNO60711 386 aa24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 CPA1P15085 419 aa24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 MKRN4PQ13434 485 aaPredicted RBP24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 GRIK4Q16099 956 aa24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 MXRA8Q9BRK3 442 aa24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 ANO3Q9BYT9 981 aa24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 SMARCAD1Q9H4L7 1026 aa24.16■■□□□ 1.46
CHRNB1-206ENST00000574054 MICAL3Q7RTP6 2002 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 SMCO2A6NFE2 343 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 hCG_1984214I3L0E3 225 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 FOSP01100 380 aaPredicted RBP24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 CDC27P30260 824 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 ERVK-21P61565 698 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 AAK1Q2M2I8 961 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 TAF2Q6P1X5 1199 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 RSPH3Q86UC2 560 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 ZNF713Q8N859 430 aaPredicted RBP24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 CYP2W1Q8TAV3 490 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 JAKMIP1Q96N16 626 aaKnown RBP24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 UHRF1Q96T88 793 aaPredicted RBP24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 SDF4Q9BRK5 362 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 IFIH1Q9BYX4 1025 aaKnown RBP24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 KCNH7Q9NS40 1196 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 FAM217BQ9NTX9 383 aaPredicted RBP24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 TMEM260Q9NX78 707 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 BARHL2Q9NY43 387 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 SLC9A2Q9UBY0 812 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 TUBE1Q9UJT0 475 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 KAT6AQ92794 2004 aa24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 COL4A4P53420 1690 aaPredicted RBP24.15■■□□□ 1.46
CHRNB1-206ENST00000574054 UPP2O95045 317 aa24.14■■□□□ 1.45
CHRNB1-206ENST00000574054 METAP2P50579 478 aaKnown RBP eCLIP24.14■■□□□ 1.45
CHRNB1-206ENST00000574054 IGBP1P78318 339 aa24.14■■□□□ 1.45
CHRNB1-206ENST00000574054 FAM26DQ5JW98 314 aa24.14■■□□□ 1.45
CHRNB1-206ENST00000574054 CCDC136Q96JN2 1154 aa24.14■■□□□ 1.45
CHRNB1-206ENST00000574054 YME1L1Q96TA2 773 aa24.14■■□□□ 1.45
CHRNB1-206ENST00000574054 AZI2Q9H6S1 392 aa24.14■■□□□ 1.45
CHRNB1-206ENST00000574054 CHRNA1P02708 482 aa24.13■■□□□ 1.45
CHRNB1-206ENST00000574054 GHRP10912 638 aa24.13■■□□□ 1.45
CHRNB1-206ENST00000574054 APOBRQ0VD83 1088 aa24.13■■□□□ 1.45
CHRNB1-206ENST00000574054 CEP55Q53EZ4 464 aa24.13■■□□□ 1.45
CHRNB1-206ENST00000574054 Q6ZUG5 572 aa24.13■■□□□ 1.45
CHRNB1-206ENST00000574054 TEX2Q8IWB9 1127 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms