RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 GOLGA6L10A0A0M3HER8 536 aa8.31□□□□□ -1.08
RPA1-207ENST00000574049 TEX33O43247 280 aa8.31□□□□□ -1.08
RPA1-207ENST00000574049 ZBED4O75132 1171 aa8.31□□□□□ -1.08
RPA1-207ENST00000574049 TOB1P50616 345 aaPredicted RBP8.31□□□□□ -1.08
RPA1-207ENST00000574049 SLC7A5Q01650 507 aa8.31□□□□□ -1.08
RPA1-207ENST00000574049 KRT25Q7Z3Z0 450 aa8.31□□□□□ -1.08
RPA1-207ENST00000574049 CCDC127Q96BQ5 260 aa8.31□□□□□ -1.08
RPA1-207ENST00000574049 SLC10A4Q96EP9 437 aa8.31□□□□□ -1.08
RPA1-207ENST00000574049 MRPL44Q9H9J2 332 aaKnown RBP8.31□□□□□ -1.08
RPA1-207ENST00000574049 AS3MTQ9HBK9 375 aa8.31□□□□□ -1.08
RPA1-207ENST00000574049 RREB1Q92766 1687 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 STK36Q9NRP7 1315 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 LAMB2P55268 1798 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 POTEMA6NI47 508 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 CLIC2O15247 247 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 ARHGAP6O43182 974 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 PYGBP11216 843 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 CTNNA2P26232 953 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 RBL2Q08999 1139 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 FUT2Q10981 343 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 CETN1Q12798 172 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 TOGARAM2Q6ZUX3 1019 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 PHLDB2Q86SQ0 1253 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 LRRN4CLQ8ND94 238 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 SPTLC3Q9NUV7 552 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 PCDHA6Q9UN73 950 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 PCDHA8Q9Y5H6 950 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.3□□□□□ -1.08
RPA1-207ENST00000574049 LRP5O75197 1615 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 FRMD3A2A2Y4 597 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 GOLGA6L9A6NEM1 432 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 RPN1P04843 607 aaKnown RBP8.3□□□□□ -1.08
RPA1-207ENST00000574049 PNMA6AP0CW24 399 aaPredicted RBP8.3□□□□□ -1.08
RPA1-207ENST00000574049 IREB2P48200 963 aaKnown RBP8.3□□□□□ -1.08
RPA1-207ENST00000574049 BIRC3Q13489 604 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 CUL4BQ13620 913 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 SEPT7Q16181 437 aaKnown RBP8.3□□□□□ -1.08
RPA1-207ENST00000574049 KIAA1755Q5JYT7 1200 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 IQCEQ6IPM2 695 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 GPBP1Q86WP2 473 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 NCAPG2Q86XI2 1143 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 ZNF280CQ8ND82 737 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 DCAF4Q8WV16 495 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 ATG4CQ96DT6 458 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 SPZ1Q9BXG8 430 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 GBP3Q9H0R5 595 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 CLGNO14967 610 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 EIF2AK2P19525 551 aaKnown RBP8.3□□□□□ -1.08
RPA1-207ENST00000574049 GBP2P32456 591 aaPredicted RBP8.3□□□□□ -1.08
RPA1-207ENST00000574049 TATDN1Q6P1N9 297 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 SHC4Q6S5L8 630 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 LDHDQ86WU2 507 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 CCDC50Q8IVM0 306 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 CCDC65Q8IXS2 484 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 PPM1EQ8WY54 764 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 GLMNQ92990 594 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 JAKMIP2Q96AA8 810 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 FERMT2Q96AC1 680 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 TMEM60Q9H2L4 133 aa8.3□□□□□ -1.08
RPA1-207ENST00000574049 ANKRD31Q8N7Z5 1873 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 BICDL2A1A5D9 508 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 OR52Z1P0C646 297 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 ICE2Q659A1 982 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 SIAH1Q8IUQ4 282 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 HDAC6Q9UBN7 1215 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 FEZ2Q9UHY8 353 aaPredicted RBP8.29□□□□□ -1.08
RPA1-207ENST00000574049 GOLGA4Q13439 2230 aaKnown RBP8.29□□□□□ -1.08
RPA1-207ENST00000574049 GCOM1H8Y6P7 765 aaPredicted RBP8.29□□□□□ -1.08
RPA1-207ENST00000574049 EXOC3O60645 756 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 POLR2MP0CAP2 368 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 KRT5P13647 590 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 VPS41P49754 854 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 RCAN1P53805 252 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 NAA25Q14CX7 972 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 WDR24Q96S15 920 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 NMRK2Q9NPI5 230 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 MYO1AQ9UBC5 1043 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 TMX2Q9Y320 296 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 CNTNAP1P78357 1384 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 IQCA1LA6NCM1 817 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 CETN3O15182 167 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 CTNND1O60716 968 aaKnown RBP8.29□□□□□ -1.08
RPA1-207ENST00000574049 POLR2FP61218 127 aaKnown RBP8.29□□□□□ -1.08
RPA1-207ENST00000574049 KRT83P78385 493 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 KIAA0753Q2KHM9 967 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.29□□□□□ -1.08
RPA1-207ENST00000574049 POTEDQ86YR6 584 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 OTUD6BQ8N6M0 293 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 SHISA4Q96DD7 197 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 PYM1Q9BRP8 204 aaKnown RBP8.29□□□□□ -1.08
RPA1-207ENST00000574049 DDX25Q9UHL0 483 aaKnown RBP8.29□□□□□ -1.08
RPA1-207ENST00000574049 DNM3Q9UQ16 869 aa8.29□□□□□ -1.08
RPA1-207ENST00000574049 GOLGA6L7A0A1B0GV03 622 aa8.28□□□□□ -1.08
RPA1-207ENST00000574049 CEP104O60308 925 aa8.28□□□□□ -1.08
RPA1-207ENST00000574049 ZNF280AP59817 542 aaPredicted RBP8.28□□□□□ -1.08
RPA1-207ENST00000574049 ARMC9Q7Z3E5 817 aa8.28□□□□□ -1.08
RPA1-207ENST00000574049 SCYL3Q8IZE3 742 aa8.28□□□□□ -1.08
RPA1-207ENST00000574049 FMR1NBQ8N0W7 255 aaPredicted RBP8.28□□□□□ -1.08
RPA1-207ENST00000574049 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms