RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ZNF746Q6NUN9 644 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 ANKRD33Q7Z3H0 272 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 SMAP1Q8IYB5 467 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 SLFN12Q8IYM2 578 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 C7orf61Q8IZ16 206 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 C7orf31Q8N865 590 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 SLC43A3Q8NBI5 491 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 LENG9Q96B70 501 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 FAM20AQ96MK3 541 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 SMARCAD1Q9H4L7 1026 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 TUT1Q9H6E5 874 aaKnown RBP14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 BCAS3Q9H6U6 928 aa14.44□□□□□ -0.1
TRAPPC1-206ENST00000573989 SUPT20HL2P0C7V6 817 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 ACTR2P61160 394 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 TLE2Q04725 743 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 BECN1Q14457 450 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 MFSD10Q14728 455 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 KIAA0753Q2KHM9 967 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 FAM160B1Q5W0V3 765 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 MIS18BP1Q6P0N0 1132 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 GLG1Q92896 1179 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 SLC5A5Q92911 643 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 C16orf70Q9BSU1 422 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 ERAP1Q9NZ08 941 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 SAMM50Q9Y512 469 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 WDR81Q562E7 1941 aa14.43□□□□□ -0.1
TRAPPC1-206ENST00000573989 EMSYQ7Z589 1322 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 GSTTP1A0A1W2PQM5 241 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 FAM205CA6NFA0 338 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 WDR64B1ANS9 1081 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 BACH1O14867 736 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 DHX15O43143 795 aaKnown RBP14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 EDIL3O43854 480 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 NEMFO60524 1076 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 ATG7O95352 703 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 PSAPP07602 524 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 CLTBP09497 229 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 GNAT1P11488 350 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 SFNP31947 248 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 SLC26A2P50443 739 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 JAK3P52333 1124 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 KAT2BQ92831 832 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 KCNMB3Q9NPA1 279 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 NOD1Q9Y239 953 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 PCDHA10Q9Y5I2 948 aa14.42□□□□□ -0.1
TRAPPC1-206ENST00000573989 VPS37CA5D8V6 355 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 HAS3O00219 553 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 SLC37A4O43826 429 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 ATP2B1P20020 1258 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 CALCRLQ16602 461 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 RILPL1Q5EBL4 403 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 PLPPR4Q7Z2D5 763 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 SESTD1Q86VW0 696 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 FAM126BQ8IXS8 530 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 RDM1Q8NG50 284 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 ETNPPLQ8TBG4 499 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 UIMC1Q96RL1 719 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 PRDM5Q9NQX1 630 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 TMEM39AQ9NV64 488 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 GRIN2DO15399 1336 aa14.41□□□□□ -0.1
TRAPPC1-206ENST00000573989 DNAH12Q6ZR08 3092 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 KIF28PB7ZC32 967 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 LGR5O75473 907 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 PSMD10O75832 226 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 MCM7P33993 719 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 STAT5BP51692 787 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 TTC38Q5R3I4 469 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 ABHD15Q6UXT9 468 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 MIER3Q7Z3K6 550 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 BRAPQ7Z569 592 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 ZNF302Q9NR11 478 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 DISC1Q9NRI5 854 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 HDAC6Q9UBN7 1215 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 GTF2IRD1Q9UHL9 959 aa14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 TRIP12Q14669 1992 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC1-206ENST00000573989 TNRC18O15417 2968 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 C17orf102A2RUQ5 167 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 CHMP2AO43633 222 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 B4GALT4O60513 344 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 CCNE2O96020 404 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 CD4P01730 458 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 SYT1P21579 422 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 FAAP100Q0VG06 881 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 PTGISQ16647 500 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 SWSAP1Q6NVH7 229 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 TRIM50Q86XT4 487 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 CCDC155Q8N6L0 562 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 AFAP1L1Q8TED9 768 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 LBHD1Q9BQE6 289 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 UNC45AQ9H3U1 944 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 PDLIM7Q9NR12 457 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 PCDHA12Q9UN75 941 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 CEP290O15078 2479 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 NRCAMQ92823 1304 aa14.39□□□□□ -0.11
TRAPPC1-206ENST00000573989 IGKV6D-21A0A0A0MT36 114 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 LAD1O00515 517 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 STX6O43752 255 aa14.38□□□□□ -0.11
TRAPPC1-206ENST00000573989 DKC1O60832 514 aaKnown RBP eCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms