RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 SYNPO2Q9UMS6 1093 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 H0YHG0 523 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 ATP8B1O43520 1251 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 PLA2G4BP0C869 781 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 PSMC6P62333 389 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 SARNPP82979 210 aaKnown RBP17.68■□□□□ 0.42
USP43-204ENST00000573955 PRKG1Q13976 671 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 C11orf91Q3C1V1 193 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 GPBP1Q86WP2 473 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 TRPM4Q8TD43 1214 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 CNOT6LQ96LI5 555 aaKnown RBP17.68■□□□□ 0.42
USP43-204ENST00000573955 FGFBP2Q9BYJ0 223 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 NT5C3AQ9H0P0 336 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 RANBP17Q9H2T7 1088 aaKnown RBP17.68■□□□□ 0.42
USP43-204ENST00000573955 KDM3AQ9Y4C1 1321 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 BICDL2A1A5D9 508 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 GCOM1H8Y6P7 765 aaPredicted RBP17.68■□□□□ 0.42
USP43-204ENST00000573955 CHMP2AO43633 222 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 CPP00450 1065 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 POLR2MP0CAP2 368 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 KCNJ6P48051 423 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 CORO7P57737 925 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 SPIRE1Q08AE8 756 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 COASYQ13057 564 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 CATSPER3Q86XQ3 398 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 CPXCR1Q8N123 301 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 TUBGCP2Q9BSJ2 902 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 POLD4Q9HCU8 107 aa17.68■□□□□ 0.42
USP43-204ENST00000573955 PVALEFA0A1B0GWK0 134 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 KLHL33A6NCF5 533 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 MTIF2P46199 727 aaKnown RBP17.67■□□□□ 0.42
USP43-204ENST00000573955 Q4G0T1 1027 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 ARHGAP29Q52LW3 1261 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 DNAJC19Q96DA6 116 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 HOMER2Q9NSB8 354 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 PANK4Q9NVE7 773 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 KRT18P05783 430 aaKnown RBP17.67■□□□□ 0.42
USP43-204ENST00000573955 TPM1P09493 284 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 EEF1GP26641 437 aaKnown RBP17.67■□□□□ 0.42
USP43-204ENST00000573955 EPS15P42566 896 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 ZNF280AP59817 542 aaPredicted RBP17.67■□□□□ 0.42
USP43-204ENST00000573955 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.42
USP43-204ENST00000573955 NBPF12Q5TAG4 269 aaPredicted RBP17.67■□□□□ 0.42
USP43-204ENST00000573955 MOXD1Q6UVY6 613 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 DEFB129Q9H1M3 183 aa17.67■□□□□ 0.42
USP43-204ENST00000573955 LGALS16A8MUM7 142 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 KLK7P49862 253 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 TNFAIP1Q13829 316 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 RAD9BQ6WBX8 426 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 MB21D1Q8N884 522 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 PANX2Q96RD6 677 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 WDR18Q9BV38 432 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 TANGO6Q9C0B7 1094 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 DNAI1Q9UI46 699 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 FEM1BQ9UK73 627 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 CCPG1Q9ULG6 757 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 PIK3CDO00329 1044 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 YBX3P16989 372 aaKnown RBP eCLIP17.66■□□□□ 0.42
USP43-204ENST00000573955 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
USP43-204ENST00000573955 KIF4BQ2VIQ3 1234 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 ADAM21Q9UKJ8 722 aa17.66■□□□□ 0.42
USP43-204ENST00000573955 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.66■□□□□ 0.42
USP43-204ENST00000573955 A0A0U1RQJ8 604 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 EML1O00423 815 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 DDNO94850 711 aaPredicted RBP17.65■□□□□ 0.42
USP43-204ENST00000573955 MNAT1P51948 309 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 HAUS3Q68CZ6 603 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 FAM160B2Q86V87 743 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 NELFCDQ8IXH7 590 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 ATRIPQ8WXE1 791 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 BMP2KQ9NSY1 1161 aaPredicted RBP17.65■□□□□ 0.42
USP43-204ENST00000573955 RGL1Q9NZL6 768 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 ITIH6Q6UXX5 1313 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 FZD9O00144 591 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 ZSCAN12O43309 604 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 HYIQ5T013 277 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 CNGA4Q8IV77 575 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 HOOK2Q96ED9 719 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 NOC4LQ9BVI4 516 aaKnown RBP17.65■□□□□ 0.42
USP43-204ENST00000573955 LRRC27Q9C0I9 530 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 PKD2L1Q9P0L9 805 aa17.65■□□□□ 0.42
USP43-204ENST00000573955 MRPL11Q9Y3B7 192 aaKnown RBP17.65■□□□□ 0.42
USP43-204ENST00000573955 IGLV3-22A0A075B6J6 115 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 SPATA31C1P0DKV0 1188 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 CYP11B2P19099 503 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 KRT9P35527 623 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 MAP3K10Q02779 954 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 MTMR2Q13614 643 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 HERC4Q5GLZ8 1057 aaPredicted RBP17.64■□□□□ 0.41
USP43-204ENST00000573955 CENPPQ6IPU0 288 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 PCMTD1Q96MG8 357 aaPredicted RBP17.64■□□□□ 0.41
USP43-204ENST00000573955 SYT17Q9BSW7 474 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 ABCB11O95342 1321 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 NFIBO00712 420 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 CCP110O43303 1012 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 RPS12P25398 132 aaKnown RBP17.64■□□□□ 0.41
USP43-204ENST00000573955 CIITAP33076 1130 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 FAM26FQ5R3K3 315 aa17.64■□□□□ 0.41
USP43-204ENST00000573955 ANGEL2Q5VTE6 544 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms