RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 GRID2IPA4D2P6 1211 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 MICALL1Q8N3F8 863 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 FAM107BQ9H098 131 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 GANQ9H2C0 597 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 AIPL1Q9NZN9 384 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 GNA14O95837 355 aa20.96■□□□□ 0.95
SCARF1-206ENST00000573852 IL1R1P14778 569 aa20.96■□□□□ 0.95
SCARF1-206ENST00000573852 HYIQ5T013 277 aa20.96■□□□□ 0.95
SCARF1-206ENST00000573852 DPP8Q6V1X1 898 aaPredicted RBP20.96■□□□□ 0.95
SCARF1-206ENST00000573852 FAM163AQ96GL9 167 aaPredicted RBP20.96■□□□□ 0.95
SCARF1-206ENST00000573852 PLIN4Q96Q06 1357 aa20.96■□□□□ 0.95
SCARF1-206ENST00000573852 PLA2G4BP0C869 781 aa20.96■□□□□ 0.95
SCARF1-206ENST00000573852 CDC37Q16543 378 aaPredicted RBP20.96■□□□□ 0.95
SCARF1-206ENST00000573852 HERC4Q5GLZ8 1057 aaPredicted RBP20.96■□□□□ 0.95
SCARF1-206ENST00000573852 CCDC65Q8IXS2 484 aa20.96■□□□□ 0.95
SCARF1-206ENST00000573852 POTEB3A0JP26 581 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 POTECB2RU33 542 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 SLC16A2P36021 539 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 LIG3P49916 1009 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 ZNF543Q08ER8 600 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 PICALMQ13492 652 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 ASIC2Q16515 512 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 POTEBQ6S5H4 581 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 GPBP1Q86WP2 473 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 MREGQ8N565 214 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 GAKO14976 1311 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 IGKV6D-41A0A0C4DH26 115 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 RAD51CO43502 376 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 ADAM9Q13443 819 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 PPP1R18Q6NYC8 613 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 USP38Q8NB14 1042 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 CUL5Q93034 780 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 EMILIN3Q9NT22 766 aa20.95■□□□□ 0.94
SCARF1-206ENST00000573852 ACTN1P12814 892 aa20.94■□□□□ 0.94
SCARF1-206ENST00000573852 GABPAQ06546 454 aa20.94■□□□□ 0.94
SCARF1-206ENST00000573852 KCNH2Q12809 1159 aa20.94■□□□□ 0.94
SCARF1-206ENST00000573852 RNPC3Q96LT9 517 aaKnown RBP20.94■□□□□ 0.94
SCARF1-206ENST00000573852 NT5C3AQ9H0P0 336 aa20.94■□□□□ 0.94
SCARF1-206ENST00000573852 ATAD5Q96QE3 1844 aa20.94■□□□□ 0.94
SCARF1-206ENST00000573852 CYP11B2P19099 503 aa20.94■□□□□ 0.94
SCARF1-206ENST00000573852 SF3B2Q13435 895 aaKnown RBP20.94■□□□□ 0.94
SCARF1-206ENST00000573852 KLHL7Q8IXQ5 586 aa20.94■□□□□ 0.94
SCARF1-206ENST00000573852 ARFGEF1Q9Y6D6 1849 aa20.94■□□□□ 0.94
SCARF1-206ENST00000573852 DNAAF5Q86Y56 855 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 ZC3H3Q8IXZ2 948 aaKnown RBP20.93■□□□□ 0.94
SCARF1-206ENST00000573852 GOLPH3Q9H4A6 298 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 TMEM59LQ9UK28 342 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 MYH4Q9Y623 1939 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 KDM3AQ9Y4C1 1321 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L10C9JJH3 530 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 MRPL12P52815 198 aaKnown RBP20.93■□□□□ 0.94
SCARF1-206ENST00000573852 PTK2Q05397 1052 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 DPY19L2P1Q6NXN4 242 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 KDM7AQ6ZMT4 941 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 CD302Q8IX05 232 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 CNBD1Q8NA66 436 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 DAGLAQ9Y4D2 1042 aa20.93■□□□□ 0.94
SCARF1-206ENST00000573852 NDUFAB1O14561 156 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 ZEB2O60315 1214 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 MYBP10242 640 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 EPS15P42566 896 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 ARSHQ5FYA8 562 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 IRF2BP2Q7Z5L9 587 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 PSTPIP2Q9H939 334 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 CCNL1Q9UK58 526 aaPredicted RBP20.92■□□□□ 0.94
SCARF1-206ENST00000573852 A6NNZ2 444 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 KCNK3O14649 394 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 GCFC2P16383 781 aaKnown RBP20.92■□□□□ 0.94
SCARF1-206ENST00000573852 SLC9A1P19634 815 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 STAT3P40763 770 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 GUCY1A3Q02108 690 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 TUBB8Q3ZCM7 444 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 ZNF571Q7Z3V5 609 aaPredicted RBP20.92■□□□□ 0.94
SCARF1-206ENST00000573852 WHAMMQ8TF30 809 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 ZHX3Q9H4I2 956 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 GGA1Q9UJY5 639 aa20.92■□□□□ 0.94
SCARF1-206ENST00000573852 ATF5Q9Y2D1 282 aaPredicted RBP20.92■□□□□ 0.94
SCARF1-206ENST00000573852 ERLIN2O94905 339 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 CLSTN1O94985 981 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 TTLL1O95922 423 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 CASP5P51878 434 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 ICE2Q659A1 982 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 KCTD1Q719H9 257 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 SLF2Q8IX21 1173 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 KAT2BQ92831 832 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L15C9J2P7 530 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L13C9JLJ4 530 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L11C9JVI0 530 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L18D6R9N7 530 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L22D6RA61 530 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L17D6RBQ6 530 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L19D6RCP7 530 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L20D6RJB6 530 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 CETN3O15182 167 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 MED24O75448 989 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 ATP2B4P23634 1241 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 RFC4P35249 363 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 TNNC1P63316 161 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 USP17L24Q0WX57 530 aa20.91■□□□□ 0.94
SCARF1-206ENST00000573852 RPS6KA1Q15418 735 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms