RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	LARP6	Q9BRS8	491 aa	Known RBP	13.62	□□□□□ -0.23
ABR-222	ENST00000573667	PBX4	Q9BYU1	374 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	SEMA6B	Q9H3T3	888 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	JPH1	Q9HDC5	661 aa	Predicted RBP	13.62	□□□□□ -0.23
ABR-222	ENST00000573667	KCNH7	Q9NS40	1196 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	ERAP1	Q9NZ08	941 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.62	□□□□□ -0.23
ABR-222	ENST00000573667	SLC9A2	Q9UBY0	812 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	SI	P14410	1827 aa		13.62	□□□□□ -0.23
ABR-222	ENST00000573667	GRXCR1	A8MXD5	290 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	PPFIA3	O75145	1194 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	NLRP5	P59047	1200 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	ANKRD1	Q15327	319 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	TNPO1	Q92973	898 aa	Known RBP	13.61	□□□□□ -0.23
ABR-222	ENST00000573667	RNPEP	Q9H4A4	650 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	SMARCAD1	Q9H4L7	1026 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	AZI2	Q9H6S1	392 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	SH3GLB2	Q9NR46	395 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	VPS54	Q9P1Q0	977 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	NFASC	O94856	1347 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	EVPL	Q92817	2033 aa		13.61	□□□□□ -0.23
ABR-222	ENST00000573667	GSTTP1	A0A1W2PQM5	241 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	TREH	O43280	583 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	CDKL5	O76039	1030 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	BAIAP3	O94812	1187 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	DEXI	O95424	95 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	AR	P10275	920 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	ATP2A2	P16615	1042 aa	Known RBP	13.6	□□□□□ -0.23
ABR-222	ENST00000573667	THPO	P40225	353 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	KCNJ6	P48051	423 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	ZNF618	Q5T7W0	954 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	NIPA1	Q7RTP0	329 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	SERINC5	Q86VE9	423 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	PLA2G4D	Q86XP0	818 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	CYP2W1	Q8TAV3	490 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	GUCD1	Q96NT3	240 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	SLC9A7	Q96T83	725 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	SLK	Q9H2G2	1235 aa	Predicted RBP	13.6	□□□□□ -0.23
ABR-222	ENST00000573667	TTYH1	Q9H313	450 aa	Predicted RBP	13.6	□□□□□ -0.23
ABR-222	ENST00000573667	ZNF576	Q9H609	170 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	AGO4	Q9HCK5	861 aa	Known RBP	13.6	□□□□□ -0.23
ABR-222	ENST00000573667	SETD4	Q9NVD3	440 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	TCEAL9	Q9UHQ7	104 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	TELO2	Q9Y4R8	837 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	EMSY	Q7Z589	1322 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	NRCAM	Q92823	1304 aa		13.6	□□□□□ -0.23
ABR-222	ENST00000573667	MEIS1	O00470	390 aa		13.59	□□□□□ -0.23
ABR-222	ENST00000573667	CYP3A4	P08684	503 aa		13.59	□□□□□ -0.23
ABR-222	ENST00000573667	MARK3	P27448	753 aa		13.59	□□□□□ -0.23
ABR-222	ENST00000573667	HOXC8	P31273	242 aa		13.59	□□□□□ -0.23
ABR-222	ENST00000573667	PBX2	P40425	430 aa		13.59	□□□□□ -0.23
ABR-222	ENST00000573667	SET	Q01105	290 aa	Predicted RBP	13.59	□□□□□ -0.23
ABR-222	ENST00000573667	HIC1	Q14526	733 aa		13.59	□□□□□ -0.23
ABR-222	ENST00000573667	CNKSR3	Q6P9H4	555 aa		13.59	□□□□□ -0.23
ABR-222	ENST00000573667	CDX2	Q99626	313 aa	Predicted RBP	13.59	□□□□□ -0.23
ABR-222	ENST00000573667	SLC28A3	Q9HAS3	691 aa		13.59	□□□□□ -0.23
ABR-222	ENST00000573667	RSPH10B2	B2RC85	870 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	KIF28P	B7ZC32	967 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	FAM86B1	E9PN63	330 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	DDX39A	O00148	427 aa	Known RBP	13.58	□□□□□ -0.24
ABR-222	ENST00000573667	CAND2	O75155	1236 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	FAM86B2	P0C5J1	330 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	RSPH10B	P0C881	870 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	XBP1	P17861	261 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	ACTR2	P61160	394 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	PPFIA1	Q13136	1202 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	TRIM71	Q2Q1W2	868 aa	Known RBP	13.58	□□□□□ -0.24
ABR-222	ENST00000573667	PHOSPHO2	Q8TCD6	241 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	LMBR1	Q8WVP7	490 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	MYLIP	Q8WY64	445 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	WNT8B	Q93098	351 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	VWCE	Q96DN2	955 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	ZNF577	Q9BSK1	485 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	C22orf23	Q9BZE7	217 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	PCDHA11	Q9Y5I1	949 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	MYO9B	Q13459	2157 aa		13.58	□□□□□ -0.24
ABR-222	ENST00000573667	NBN	O60934	754 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	EFCAB14	O75071	495 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	CXCL10	P02778	98 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	FOSL2	P15408	326 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	STAT5B	P51692	787 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	RABGGTB	P53611	331 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	AK2	P54819	239 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	SCRN1	Q12765	414 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	ITGB3BP	Q13352	177 aa	Predicted RBP	13.57	□□□□□ -0.24
ABR-222	ENST00000573667	IKBKE	Q14164	716 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	GRIK4	Q16099	956 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	RSPH3	Q86UC2	560 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	FAM177A1	Q8N128	213 aa	Predicted RBP	13.57	□□□□□ -0.24
ABR-222	ENST00000573667	RASGRP4	Q8TDF6	673 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	NKX2-4	Q9H2Z4	354 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	PCDHA4	Q9UN74	947 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	TRPC6	Q9Y210	931 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	NLRC5	Q86WI3	1866 aa		13.57	□□□□□ -0.24
ABR-222	ENST00000573667	IGLV3-22	A0A075B6J6	115 aa		13.56	□□□□□ -0.24
ABR-222	ENST00000573667	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.56	□□□□□ -0.24
ABR-222	ENST00000573667	RRN3P2	A6NIE6	340 aa		13.56	□□□□□ -0.24
ABR-222	ENST00000573667	IPO5	O00410	1097 aa	Known RBP	13.56	□□□□□ -0.24
ABR-222	ENST00000573667	BACH1	O14867	736 aa		13.56	□□□□□ -0.24
ABR-222	ENST00000573667	ADAMTS3	O15072	1205 aa		13.56	□□□□□ -0.24

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