RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 SPECC1Q5M775 1068 aa15.21■□□□□ 0.03
LINC01996-201ENST00000573270 ZNF746Q6NUN9 644 aaPredicted RBP15.21■□□□□ 0.03
LINC01996-201ENST00000573270 B3GNT9Q6UX72 402 aa15.21■□□□□ 0.03
LINC01996-201ENST00000573270 CLEC17AQ6ZS10 378 aa15.21■□□□□ 0.03
LINC01996-201ENST00000573270 MIER3Q7Z3K6 550 aa15.21■□□□□ 0.03
LINC01996-201ENST00000573270 IGSF22Q8N9C0 903 aa15.21■□□□□ 0.03
LINC01996-201ENST00000573270 TMEM87AQ8NBN3 555 aa15.21■□□□□ 0.03
LINC01996-201ENST00000573270 GIMAP8Q8ND71 665 aaPredicted RBP15.21■□□□□ 0.03
LINC01996-201ENST00000573270 SPATA33Q96N06 139 aa15.21■□□□□ 0.03
LINC01996-201ENST00000573270 HMX1Q9NP08 348 aaPredicted RBP15.21■□□□□ 0.03
LINC01996-201ENST00000573270 PCDHA7Q9UN72 937 aa15.21■□□□□ 0.03
LINC01996-201ENST00000573270 PCDHA12Q9UN75 941 aa15.21■□□□□ 0.03
LINC01996-201ENST00000573270 WDR64B1ANS9 1081 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 NOP56O00567 594 aaKnown RBP15.2■□□□□ 0.02
LINC01996-201ENST00000573270 CUTAO60888 179 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 MMP3P08254 477 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 CCL5P13501 91 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 JAK3P52333 1124 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 AXDND1Q5T1B0 1012 aaPredicted RBP15.2■□□□□ 0.02
LINC01996-201ENST00000573270 TRIM50Q86XT4 487 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 SNX29Q8TEQ0 813 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 AFG1LQ8WV93 481 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 EMID1Q96A84 441 aaPredicted RBP15.2■□□□□ 0.02
LINC01996-201ENST00000573270 ZNF333Q96JL9 665 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 GPR20Q99678 358 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 ANP32EQ9BTT0 268 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 MCOLN1Q9GZU1 580 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 XPNPEP3Q9NQH7 507 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 LRWD1Q9UFC0 647 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 SAMM50Q9Y512 469 aa15.2■□□□□ 0.02
LINC01996-201ENST00000573270 IGSF9BQ9UPX0 1349 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 MYH9P35579 1960 aaKnown RBP15.19■□□□□ 0.02
LINC01996-201ENST00000573270 DYNC1LI2O43237 492 aaPredicted RBP15.19■□□□□ 0.02
LINC01996-201ENST00000573270 DUSP11O75319 330 aaKnown RBP15.19■□□□□ 0.02
LINC01996-201ENST00000573270 PGK1P00558 417 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 SUPT20HL2P0C7V6 817 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 ZNF286BP0CG31 522 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 CDC25AP30304 524 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 LONP1P36776 959 aaKnown RBP15.19■□□□□ 0.02
LINC01996-201ENST00000573270 BEX3Q00994 111 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 CYP4A11Q02928 519 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 UGCGQ16739 394 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 CSPP1Q1MSJ5 1256 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 SHC4Q6S5L8 630 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 CCDC60Q8IWA6 550 aaPredicted RBP15.19■□□□□ 0.02
LINC01996-201ENST00000573270 PPTC7Q8NI37 304 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 SYMPKQ92797 1274 aaKnown RBP15.19■□□□□ 0.02
LINC01996-201ENST00000573270 ARMC5Q96C12 935 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 AP5M1Q9H0R1 490 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 UPF3AQ9H1J1 476 aaKnown RBP15.19■□□□□ 0.02
LINC01996-201ENST00000573270 CENPFP49454 3210 aa15.19■□□□□ 0.02
LINC01996-201ENST00000573270 POTEB3A0JP26 581 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 ADAMTS4O75173 837 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 GADD45BO75293 160 aaPredicted RBP15.18■□□□□ 0.02
LINC01996-201ENST00000573270 C6orf222P0C671 652 aaPredicted RBP15.18■□□□□ 0.02
LINC01996-201ENST00000573270 SFNP31947 248 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 TCF7P36402 384 aaPredicted RBP15.18■□□□□ 0.02
LINC01996-201ENST00000573270 LAMC2Q13753 1193 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 POTEBQ6S5H4 581 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 USP49Q70CQ1 688 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 SMAP1Q8IYB5 467 aaPredicted RBP15.18■□□□□ 0.02
LINC01996-201ENST00000573270 BANK1Q8NDB2 785 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 DYDC2Q96IM9 177 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 EIF2AK1Q9BQI3 630 aaKnown RBP15.18■□□□□ 0.02
LINC01996-201ENST00000573270 MMTAG2Q9BU76 263 aaKnown RBP15.18■□□□□ 0.02
LINC01996-201ENST00000573270 GOLPH3LQ9H4A5 285 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 PAK6Q9NQU5 681 aaPredicted RBP15.18■□□□□ 0.02
LINC01996-201ENST00000573270 DISC1Q9NRI5 854 aa15.18■□□□□ 0.02
LINC01996-201ENST00000573270 GSTTP1A0A1W2PQM5 241 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 CTAGE5O15320 804 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 MSCO60682 206 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 MED24O75448 989 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
LINC01996-201ENST00000573270 GJA9P57773 515 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 UTP14CQ5TAP6 766 aaKnown RBP15.17■□□□□ 0.02
LINC01996-201ENST00000573270 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 MIS18BP1Q6P0N0 1132 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 POTEGQ6S5H5 508 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 ABHD15Q6UXT9 468 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 CABP7Q86V35 215 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 RDM1Q8NG50 284 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 ERMNQ8TAM6 284 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 EPSTI1Q96J88 318 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 AK8Q96MA6 479 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 LXNQ9BS40 222 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 RGL1Q9NZL6 768 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 WRAP73Q9P2S5 460 aaPredicted RBP15.17■□□□□ 0.02
LINC01996-201ENST00000573270 EMSYQ7Z589 1322 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 KDM3AQ9Y4C1 1321 aa15.17■□□□□ 0.02
LINC01996-201ENST00000573270 BACH1O14867 736 aa15.16■□□□□ 0.02
LINC01996-201ENST00000573270 PRPF40AO75400 957 aaKnown RBP15.16■□□□□ 0.02
LINC01996-201ENST00000573270 LGALS2P05162 132 aa15.16■□□□□ 0.02
LINC01996-201ENST00000573270 PSAPP07602 524 aa15.16■□□□□ 0.02
LINC01996-201ENST00000573270 PFKFB1P16118 471 aa15.16■□□□□ 0.02
LINC01996-201ENST00000573270 CCT6AP40227 531 aaKnown RBP15.16■□□□□ 0.02
LINC01996-201ENST00000573270 CPT1AP50416 773 aa15.16■□□□□ 0.02
LINC01996-201ENST00000573270 CTTNQ14247 550 aaKnown RBP15.16■□□□□ 0.02
LINC01996-201ENST00000573270 KARSQ15046 597 aaKnown RBP15.16■□□□□ 0.02
LINC01996-201ENST00000573270 EPHA7Q15375 998 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms