RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 ANGPT1Q15389 498 aa15.28■□□□□ 0.04
CCDC40-208ENST00000572270 FAM26DQ5JW98 314 aa15.28■□□□□ 0.04
CCDC40-208ENST00000572270 CELF3Q5SZQ8 465 aaKnown RBP15.28■□□□□ 0.04
CCDC40-208ENST00000572270 KCNV1Q6PIU1 500 aa15.28■□□□□ 0.04
CCDC40-208ENST00000572270 MCF2L2Q86YR7 1114 aa15.28■□□□□ 0.04
CCDC40-208ENST00000572270 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC40-208ENST00000572270 ABCB11O95342 1321 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 ENPP3O14638 875 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 PPFIA3O75145 1194 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 TOP1P11387 765 aaKnown RBP15.27■□□□□ 0.04
CCDC40-208ENST00000572270 TECP42680 631 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 NOVP48745 357 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 DUSP6Q16828 381 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 PAN2Q504Q3 1202 aaKnown RBP15.27■□□□□ 0.04
CCDC40-208ENST00000572270 FLCNQ8NFG4 579 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 APOL5Q9BWW9 433 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 MLXIPQ9HAP2 919 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 COL20A1Q9P218 1284 aa15.27■□□□□ 0.04
CCDC40-208ENST00000572270 NCOR2Q9Y618 2525 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 LGALS2P05162 132 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 NR3C2P08235 984 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 PDHBP11177 359 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 UBE3AQ05086 875 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 CTDSPL2Q05D32 466 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 ANKRD54Q6NXT1 300 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 VN1R2Q8NFZ6 395 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 TBC1D5Q92609 795 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 TMEM47Q9BQJ4 181 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 S1PR5Q9H228 398 aa15.26■□□□□ 0.03
CCDC40-208ENST00000572270 CACNA1GO43497 2377 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 NOP56O00567 594 aaKnown RBP15.25■□□□□ 0.03
CCDC40-208ENST00000572270 ARHGAP4P98171 946 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 ZNF543Q08ER8 600 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 SPOUT1Q5T280 376 aaKnown RBP15.25■□□□□ 0.03
CCDC40-208ENST00000572270 NPAS4Q8IUM7 802 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 CCDC105Q8IYK2 499 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 SMOC2Q9H3U7 446 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 PXMP2Q9NR77 195 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 TOMM22Q9NS69 142 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 SETD4Q9NVD3 440 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 DLL3Q9NYJ7 618 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 PCDHB12Q9Y5F1 795 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 FRYLO94915 3013 aa15.25■□□□□ 0.03
CCDC40-208ENST00000572270 MYO10Q9HD67 2058 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 C2CD4DB7Z1M9 353 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 CHRNA1P02708 482 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 STAG3L1P0CL83 205 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
CCDC40-208ENST00000572270 HOXB8P17481 243 aaPredicted RBP15.24■□□□□ 0.03
CCDC40-208ENST00000572270 AOC1P19801 751 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 UBA1P22314 1058 aaKnown RBP15.24■□□□□ 0.03
CCDC40-208ENST00000572270 LPIN1Q14693 890 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 ST3GAL2Q16842 350 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 CWF19L1Q69YN2 538 aaKnown RBP15.24■□□□□ 0.03
CCDC40-208ENST00000572270 PDE12Q6L8Q7 609 aaKnown RBP15.24■□□□□ 0.03
CCDC40-208ENST00000572270 CES5AQ6NT32 575 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 TMEM184AQ6ZMB5 413 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 RSPH3Q86UC2 560 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 NECTIN4Q96NY8 510 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 EHMT1Q9H9B1 1298 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 AAASQ9NRG9 546 aa15.24■□□□□ 0.03
CCDC40-208ENST00000572270 MYCLP12524 364 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-208ENST00000572270 CDC37Q16543 378 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-208ENST00000572270 LLGL2Q6P1M3 1020 aa15.23■□□□□ 0.03
CCDC40-208ENST00000572270 SYCE2Q6PIF2 218 aa15.23■□□□□ 0.03
CCDC40-208ENST00000572270 DTWD2Q8NBA8 298 aa15.23■□□□□ 0.03
CCDC40-208ENST00000572270 CYP2W1Q8TAV3 490 aa15.23■□□□□ 0.03
CCDC40-208ENST00000572270 GPATCH3Q96I76 525 aa15.23■□□□□ 0.03
CCDC40-208ENST00000572270 RTP3Q9BQQ7 232 aa15.23■□□□□ 0.03
CCDC40-208ENST00000572270 USP26Q9BXU7 913 aa15.23■□□□□ 0.03
CCDC40-208ENST00000572270 ECHDC1Q9NTX5 307 aa15.23■□□□□ 0.03
CCDC40-208ENST00000572270 ZNF215Q9UL58 517 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-208ENST00000572270 MRPL11Q9Y3B7 192 aaKnown RBP15.23■□□□□ 0.03
CCDC40-208ENST00000572270 EP300Q09472 2414 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-208ENST00000572270 TPRP12270 2363 aaKnown RBP15.22■□□□□ 0.03
CCDC40-208ENST00000572270 KAT6AQ92794 2004 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 MYH6P13533 1939 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 ASGR2P07307 311 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 TGFB3P10600 412 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 TPRNQ4KMQ1 711 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 GPATCH4Q5T3I0 446 aaKnown RBP15.22■□□□□ 0.03
CCDC40-208ENST00000572270 TAF2Q6P1X5 1199 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 TSHZ1Q6ZSZ6 1077 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 TDRD5Q8NAT2 981 aaKnown RBP15.22■□□□□ 0.03
CCDC40-208ENST00000572270 LMBR1Q8WVP7 490 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 FTHL17Q9BXU8 183 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 POMKQ9H5K3 350 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 LRFN2Q9ULH4 789 aa15.22■□□□□ 0.03
CCDC40-208ENST00000572270 CFAP47Q6ZTR5 3102 aa15.21■□□□□ 0.03
CCDC40-208ENST00000572270 ORC4O43929 436 aa15.21■□□□□ 0.03
CCDC40-208ENST00000572270 CFBP00751 764 aa15.21■□□□□ 0.03
CCDC40-208ENST00000572270 MGAT3Q09327 533 aa15.21■□□□□ 0.03
CCDC40-208ENST00000572270 RSPO4Q2I0M5 234 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-208ENST00000572270 RRP12Q5JTH9 1297 aaKnown RBP15.21■□□□□ 0.03
CCDC40-208ENST00000572270 PLPP4Q5VZY2 271 aa15.21■□□□□ 0.03
CCDC40-208ENST00000572270 ZC3H14Q6PJT7 736 aaKnown RBP15.21■□□□□ 0.03
CCDC40-208ENST00000572270 THNSL1Q8IYQ7 743 aa15.21■□□□□ 0.03
CCDC40-208ENST00000572270 RASGRP4Q8TDF6 673 aa15.21■□□□□ 0.03
CCDC40-208ENST00000572270 RUBCNQ92622 972 aa15.21■□□□□ 0.03
CCDC40-208ENST00000572270 CASP10Q92851 521 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms