RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TNFRSF25Q93038 417 aa9.95□□□□□ -0.82
SMG6-210ENST00000572205 PCYT2Q99447 389 aa9.95□□□□□ -0.82
SMG6-210ENST00000572205 MPHOSPH6Q99547 160 aaKnown RBP9.95□□□□□ -0.82
SMG6-210ENST00000572205 SENP7Q9BQF6 1050 aa9.95□□□□□ -0.82
SMG6-210ENST00000572205 JADE2Q9NQC1 790 aa9.95□□□□□ -0.82
SMG6-210ENST00000572205 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
SMG6-210ENST00000572205 RTEL1Q9NZ71 1219 aa9.95□□□□□ -0.82
SMG6-210ENST00000572205 MROH7Q68CQ1 1323 aa9.95□□□□□ -0.82
SMG6-210ENST00000572205 KIAA1671Q9BY89 1806 aa9.95□□□□□ -0.82
SMG6-210ENST00000572205 VCANP13611 3396 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 B4DLN1 442 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 MEIS1O00470 390 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 DHX15O43143 795 aaKnown RBP9.94□□□□□ -0.82
SMG6-210ENST00000572205 SORBS3O60504 671 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 SLC34A2O95436 690 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 CCNE2O96020 404 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 LGALS2P05162 132 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 MYL3P08590 195 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 ARP10275 920 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 FECHP22830 423 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 MRPL12P52815 198 aaKnown RBP9.94□□□□□ -0.82
SMG6-210ENST00000572205 ADAM17P78536 824 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 FOXK1P85037 733 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 ARHGAP4P98171 946 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 FGD1P98174 961 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 LAMC2Q13753 1193 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 EARS2Q5JPH6 523 aaKnown RBP9.94□□□□□ -0.82
SMG6-210ENST00000572205 GDF6Q6KF10 455 aaPredicted RBP9.94□□□□□ -0.82
SMG6-210ENST00000572205 KCNV1Q6PIU1 500 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 NECAB1Q8N987 351 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 MBOAT7Q96N66 472 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 MXRA8Q9BRK3 442 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 PHF20Q9BVI0 1012 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 PRDM5Q9NQX1 630 aaPredicted RBP9.94□□□□□ -0.82
SMG6-210ENST00000572205 SH3GLB2Q9NR46 395 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 NAP1L2Q9ULW6 460 aaPredicted RBP9.94□□□□□ -0.82
SMG6-210ENST00000572205 EVPLQ92817 2033 aa9.94□□□□□ -0.82
SMG6-210ENST00000572205 NFASCO94856 1347 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 EMSYQ7Z589 1322 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 GSTTP1A0A1W2PQM5 241 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 SPDYE3A6NKU9 549 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 JAK2O60674 1132 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 DEXIO95424 95 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 TIMP1P01033 207 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 CIITAP33076 1130 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 MBTPS1Q14703 1052 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 TCTN1Q2MV58 587 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 LRIT3Q3SXY7 679 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 GNPTABQ3T906 1256 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 CEP55Q53EZ4 464 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 JAKMIP3Q5VZ66 844 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 B3GNT9Q6UX72 402 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 CYFIP1Q7L576 1253 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 NIPA1Q7RTP0 329 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 TDHQ8IZJ6 230 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 REXO1Q8N1G1 1221 aaKnown RBP9.93□□□□□ -0.82
SMG6-210ENST00000572205 SPATA33Q96N06 139 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 SEZ6LQ9BYH1 1024 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 AGO4Q9HCK5 861 aaKnown RBP9.93□□□□□ -0.82
SMG6-210ENST00000572205 KCNH7Q9NS40 1196 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 GTF2IRD1Q9UHL9 959 aa9.93□□□□□ -0.82
SMG6-210ENST00000572205 NLRC5Q86WI3 1866 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 IGKV6D-21A0A0A0MT36 114 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 FAM205CA6NFA0 338 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 TTLL13PA6NNM8 815 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 WNT7AO00755 349 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 KPNA6O60684 536 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 LGR5O75473 907 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 FOSP01100 380 aaPredicted RBP9.92□□□□□ -0.82
SMG6-210ENST00000572205 CYP2C9P11712 490 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 CYP2C18P33260 490 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 PSEN2P49810 448 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 NEK4P51957 841 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 PTPN11Q06124 597 aaPredicted RBP9.92□□□□□ -0.82
SMG6-210ENST00000572205 MTMR1Q13613 665 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 SHHQ15465 462 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 DGKDQ16760 1214 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 KIAA0753Q2KHM9 967 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 MFSD5Q6N075 450 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 DHX37Q8IY37 1157 aaKnown RBP9.92□□□□□ -0.82
SMG6-210ENST00000572205 FAM177A1Q8N128 213 aaPredicted RBP9.92□□□□□ -0.82
SMG6-210ENST00000572205 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 TBC1D32Q96NH3 1257 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 OSBPL7Q9BZF2 842 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 HDAC6Q9UBN7 1215 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 PCDHA4Q9UN74 947 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 KCNJ14Q9UNX9 436 aa9.92□□□□□ -0.82
SMG6-210ENST00000572205 DCDC2CA8MYV0 355 aa9.91□□□□□ -0.82
SMG6-210ENST00000572205 ZEB2O60315 1214 aa9.91□□□□□ -0.82
SMG6-210ENST00000572205 PPFIA4O75335 1185 aa9.91□□□□□ -0.82
SMG6-210ENST00000572205 ATG7O95352 703 aa9.91□□□□□ -0.82
SMG6-210ENST00000572205 CSF2RAP15509 400 aa9.91□□□□□ -0.82
SMG6-210ENST00000572205 ZNF200P98182 395 aaPredicted RBP9.91□□□□□ -0.82
SMG6-210ENST00000572205 NEDD9Q14511 834 aa9.91□□□□□ -0.82
SMG6-210ENST00000572205 TMEM240Q5SV17 173 aa9.91□□□□□ -0.82
SMG6-210ENST00000572205 FAM109BQ6ICB4 259 aaPredicted RBP9.91□□□□□ -0.82
SMG6-210ENST00000572205 CCDC148Q8NFR7 591 aa9.91□□□□□ -0.82
SMG6-210ENST00000572205 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
SMG6-210ENST00000572205 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.91□□□□□ -0.828e-7■■■■■ 32.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms