RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 PHF20L1A8MW92 1017 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 BHMG1C9JSJ3 638 aaPredicted RBP16.88■□□□□ 0.29
SMG6-207ENST00000570756 KIF3CO14782 793 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 PPIP5K2O43314 1243 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 BUB1BO60566 1050 aaPredicted RBP16.88■□□□□ 0.29
SMG6-207ENST00000570756 TLR2O60603 784 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 KIF4AO95239 1232 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 DYNLL1P63167 89 aaKnown RBP16.88■□□□□ 0.29
SMG6-207ENST00000570756 KCNMA1Q12791 1236 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 PPP1R7Q15435 360 aa16.88■□□□□ 0.29
SMG6-207ENST00000570756 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
SMG6-207ENST00000570756 OPLAHO14841 1288 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 SART1O43290 800 aaKnown RBP16.87■□□□□ 0.29
SMG6-207ENST00000570756 CEP104O60308 925 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 VPS72Q15906 364 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 HIBCHQ6NVY1 386 aaPredicted RBP16.87■□□□□ 0.29
SMG6-207ENST00000570756 MAB21L3Q8N8X9 362 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 CCDC26Q8TAB7 109 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 BAIAP2L1Q9UHR4 511 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 NUP98P52948 1817 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 CCNT1O60563 726 aaKnown RBP16.87■□□□□ 0.29
SMG6-207ENST00000570756 RTN2O75298 545 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 POLR2FP61218 127 aaKnown RBP16.87■□□□□ 0.29
SMG6-207ENST00000570756 IRX1P78414 480 aaPredicted RBP16.87■□□□□ 0.29
SMG6-207ENST00000570756 KLHL30Q0D2K2 578 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 SPDYCQ5MJ68 293 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 ERMARDQ5T6L9 678 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 KRT25Q7Z3Z0 450 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 HEATR3Q7Z4Q2 680 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 TMC3Q7Z5M5 1100 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 HOOK3Q86VS8 718 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 XPO6Q96QU8 1125 aaKnown RBP16.87■□□□□ 0.29
SMG6-207ENST00000570756 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMG6-207ENST00000570756 LSM14BQ9BX40 385 aaKnown RBP16.87■□□□□ 0.29
SMG6-207ENST00000570756 FAM129AQ9BZQ8 928 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 SLITRK6Q9H5Y7 841 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 QTRT2Q9H974 415 aaKnown RBP16.87■□□□□ 0.29
SMG6-207ENST00000570756 BARHL2Q9NY43 387 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 COL4A3BPQ9Y5P4 624 aa16.87■□□□□ 0.29
SMG6-207ENST00000570756 MYH7BA7E2Y1 1941 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 PSMD2Q13200 908 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 RIPK1Q13546 671 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 RAPGEF1Q13905 1077 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 ITIH4Q14624 930 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 SLMAPQ14BN4 828 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 ZKSCAN8Q15776 578 aaPredicted RBP16.86■□□□□ 0.29
SMG6-207ENST00000570756 DDX42Q86XP3 938 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMG6-207ENST00000570756 LRRC27Q9C0I9 530 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 FAM114A2Q9NRY5 505 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 A0A1B0GUL6 1792 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 CACNA1SQ13698 1873 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 A0A087X0T9 212 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 CFAP73A6NFT4 308 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 BACH1O14867 736 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 NOL4O94818 638 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 RPSAP08865 295 aaKnown RBP16.86■□□□□ 0.29
SMG6-207ENST00000570756 FAM228BP0C875 321 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 TECP42680 631 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 LETM2Q2VYF4 491 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 CEP120Q8N960 986 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 CCDC63Q8NA47 563 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 NEUROG2Q9H2A3 272 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 ADAMTS1Q9UHI8 967 aa16.86■□□□□ 0.29
SMG6-207ENST00000570756 KRIT1O00522 736 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 ASAP2O43150 1006 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 CTNND1O60716 968 aaKnown RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 FKBP3Q00688 224 aaKnown RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 PPARDQ03181 441 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMG6-207ENST00000570756 ASIC2Q16515 512 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 CDK5RAP3Q96JB5 506 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 EBF2Q9HAK2 575 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 AIPL1Q9NZN9 384 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 NOC2LQ9Y3T9 749 aaKnown RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 MYH4Q9Y623 1939 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 ZNF804BA4D1E1 1349 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 MYMKA6NI61 221 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 F8VZ95 297 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 F8W031 263 aaPredicted RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 STXBP3O00186 592 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 PPP1R12BO60237 982 aaPredicted RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 NT5C2P49902 561 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 DHX9Q08211 1270 aaKnown RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 ORC2Q13416 577 aaPredicted RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 GRM4Q14833 912 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 CCDC152Q4G0S7 254 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 DGKHQ86XP1 1220 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 PNMA1Q8ND90 353 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 LARP4BQ92615 738 aaKnown RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 TLCD1Q96CP7 247 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 TBC1D31Q96DN5 1066 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 MMTAG2Q9BU76 263 aaKnown RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 ASAP1Q9ULH1 1129 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 SLC12A4Q9UP95 1085 aa16.85■□□□□ 0.29
SMG6-207ENST00000570756 UTP11Q9Y3A2 253 aaKnown RBP16.85■□□□□ 0.29
SMG6-207ENST00000570756 LAMB1P07942 1786 aa16.84■□□□□ 0.29
SMG6-207ENST00000570756 DAPK3O43293 454 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms