RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 EVCP57679 992 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 SP4Q02446 784 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 BECN1Q14457 450 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 ZNF618Q5T7W0 954 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 TEX2Q8IWB9 1127 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 ZNF274Q96GC6 653 aaPredicted RBP17.27■□□□□ 0.36
RAB40B-203ENST00000570676 CDHR1Q96JP9 859 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 PGBD1Q96JS3 809 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 ZSCAN31Q96LW9 406 aaPredicted RBP17.27■□□□□ 0.36
RAB40B-203ENST00000570676 RNPEPQ9H4A4 650 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 BARHL2Q9NY43 387 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 V9GY48 417 aaPredicted RBP17.27■□□□□ 0.36
RAB40B-203ENST00000570676 MYO9BQ13459 2157 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 K7ELQ4 463 aaPredicted RBP17.26■□□□□ 0.35
RAB40B-203ENST00000570676 LARGE1O95461 756 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 PDIA3P30101 505 aaKnown RBP17.26■□□□□ 0.35
RAB40B-203ENST00000570676 ADD1P35611 737 aaKnown RBP17.26■□□□□ 0.35
RAB40B-203ENST00000570676 CLK2P49760 499 aaKnown RBP17.26■□□□□ 0.35
RAB40B-203ENST00000570676 ADCY7P51828 1080 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 WDR5P61964 334 aaKnown RBP17.26■□□□□ 0.35
RAB40B-203ENST00000570676 STK3Q13188 491 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 MTMR1Q13613 665 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 ME3Q16798 604 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 PPP2R2DQ66LE6 453 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 CNKSR3Q6P9H4 555 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 USP38Q8NB14 1042 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 GIMAP8Q8ND71 665 aaPredicted RBP17.26■□□□□ 0.35
RAB40B-203ENST00000570676 TMX3Q96JJ7 454 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 ANO3Q9BYT9 981 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 SLC28A3Q9HAS3 691 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 JADE2Q9NQC1 790 aa17.26■□□□□ 0.35
RAB40B-203ENST00000570676 ZNF215Q9UL58 517 aaPredicted RBP17.26■□□□□ 0.35
RAB40B-203ENST00000570676 TREHO43280 583 aa17.25■□□□□ 0.35
RAB40B-203ENST00000570676 TCF7P36402 384 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-203ENST00000570676 ADAM17P78536 824 aa17.25■□□□□ 0.35
RAB40B-203ENST00000570676 ADGRE1Q14246 886 aa17.25■□□□□ 0.35
RAB40B-203ENST00000570676 PFKFB3Q16875 520 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-203ENST00000570676 UTP14CQ5TAP6 766 aaKnown RBP17.25■□□□□ 0.35
RAB40B-203ENST00000570676 HERC6Q8IVU3 1022 aa17.25■□□□□ 0.35
RAB40B-203ENST00000570676 PHOSPHO2Q8TCD6 241 aa17.25■□□□□ 0.35
RAB40B-203ENST00000570676 LMBR1Q8WVP7 490 aa17.25■□□□□ 0.35
RAB40B-203ENST00000570676 ATP6V0A1Q93050 837 aa17.25■□□□□ 0.35
RAB40B-203ENST00000570676 SLKQ9H2G2 1235 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-203ENST00000570676 EHMT1Q9H9B1 1298 aa17.25■□□□□ 0.35
RAB40B-203ENST00000570676 SH2B1Q9NRF2 756 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-203ENST00000570676 PKD2L1Q9P0L9 805 aa17.25■□□□□ 0.35
RAB40B-203ENST00000570676 GSTTP1A0A1W2PQM5 241 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 SMCO2A6NFE2 343 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 CA3P07451 260 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 SCG2P13521 617 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 DEFB103AP81534 67 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
RAB40B-203ENST00000570676 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 CYP2W1Q8TAV3 490 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 GAS2L1Q99501 681 aaPredicted RBP17.24■□□□□ 0.35
RAB40B-203ENST00000570676 MXRA8Q9BRK3 442 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 SETD4Q9NVD3 440 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 TMEM260Q9NX78 707 aa17.24■□□□□ 0.35
RAB40B-203ENST00000570676 EMSYQ7Z589 1322 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 WDR81Q562E7 1941 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 CCDC196A0A1B0GTZ2 297 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 ESYT2A0FGR8 921 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 ADAMTS3O15072 1205 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 MAFGO15525 162 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 PFKFB2O60825 505 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 FOSP01100 380 aaPredicted RBP17.23■□□□□ 0.35
RAB40B-203ENST00000570676 SREBF1P36956 1147 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 THPOP40225 353 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 KCNJ6P48051 423 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
RAB40B-203ENST00000570676 NTRK3Q16288 839 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 PKN1Q16512 942 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 KCNH7Q9NS40 1196 aa17.23■□□□□ 0.35
RAB40B-203ENST00000570676 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 RSPH10B2B2RC85 870 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 DLL1O00548 723 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 CAND2O75155 1236 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 LGR5O75473 907 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 RSPH10BP0C881 870 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 TMCO2Q7Z6W1 182 aaPredicted RBP17.22■□□□□ 0.35
RAB40B-203ENST00000570676 CRYGNQ8WXF5 182 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 SEPT1Q8WYJ6 367 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 PCYT2Q99447 389 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 OSBPL7Q9BZF2 842 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 GLT8D2Q9H1C3 349 aa17.22■□□□□ 0.35
RAB40B-203ENST00000570676 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
RAB40B-203ENST00000570676 JPH1Q9HDC5 661 aaPredicted RBP17.22■□□□□ 0.35
RAB40B-203ENST00000570676 NFASCO94856 1347 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 COL4A6Q14031 1691 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 ABHD14A-ACY1A0A1B0GW23 586 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 PRPF3O43395 683 aaKnown RBP17.21■□□□□ 0.35
RAB40B-203ENST00000570676 CTSHP09668 335 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 ARP10275 920 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 ARHGAP4P98171 946 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 SCRN1Q12765 414 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 ITGB3BPQ13352 177 aaPredicted RBP17.21■□□□□ 0.35
RAB40B-203ENST00000570676 CEP55Q53EZ4 464 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 SPRED2Q7Z698 418 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms