RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GNAT1P11488 350 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 KCNA5P22460 613 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 MCM5P33992 734 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 TCF7P36402 384 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 HTRA4P83105 476 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 EP400NLQ6ZTU2 488 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 HEATR3Q7Z4Q2 680 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 NLRX1Q86UT6 975 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 IFIH1Q9BYX4 1025 aaKnown RBP9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 LSG1Q9H089 658 aaKnown RBP9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 UBE2ZQ9H832 354 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 CD320Q9NPF0 282 aa9.9□□□□□ -0.82
CTDNEP1-203ENST00000570385 SIP14410 1827 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 XIRP2A4UGR9 3374 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 GSTTP1A0A1W2PQM5 241 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 PIK3CDO00329 1044 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 KCNA2P16389 499 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 ITGB5P18084 799 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 GNAQP50148 359 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 IGBP1P78318 339 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 ADAM17P78536 824 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 PPFIA1Q13136 1202 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 GPM6BQ13491 265 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 EPC2Q52LR7 807 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 CREB3L3Q68CJ9 461 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 MICU3Q86XE3 530 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 GLG1Q92896 1179 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 TOP1MTQ969P6 601 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 PGBD1Q96JS3 809 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 TCEANC2Q96MN5 208 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 MAP3K14Q99558 947 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 LZTS2Q9BRK4 669 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 ESYT1Q9BSJ8 1104 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 ANO2Q9NQ90 1003 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 LMCD1Q9NZU5 365 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 SLC12A7Q9Y666 1083 aa9.89□□□□□ -0.83
CTDNEP1-203ENST00000570385 NRCAMQ92823 1304 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 FAM86C2PA6NEL3 165 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 SPDYE3A6NKU9 549 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 H3BQ06 376 aaPredicted RBP9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 IL9P15248 144 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 SMARCA1P28370 1054 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 MTMR1Q13613 665 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 GRIK4Q16099 956 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 XRRA1Q6P2D8 792 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 POTEDQ86YR6 584 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 TMEM192Q8IY95 271 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 TMTC2Q8N394 836 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 FANCBQ8NB91 859 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 CYP2W1Q8TAV3 490 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 SP7Q8TDD2 431 aaPredicted RBP9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 DNAJB3Q8WWF6 145 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 SEPT1Q8WYJ6 367 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 GPRASP2Q96D09 838 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 MRPL38Q96DV4 380 aaKnown RBP9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 TMEM87BQ96K49 555 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 SENP7Q9BQF6 1050 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 C1QTNF1Q9BXJ1 281 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 FAM49AQ9H0Q0 323 aaPredicted RBP9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 PCDHA6Q9UN73 950 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 PCDHA8Q9Y5H6 950 aa9.88□□□□□ -0.83
CTDNEP1-203ENST00000570385 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 CAND2O75155 1236 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 IBSPP21815 317 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 TMEM62Q0P6H9 643 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 LPIN1Q14693 890 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 NECTIN1Q15223 517 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 TCEAL5Q5H9L2 206 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 FAM26DQ5JW98 314 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 MARCH8Q5T0T0 291 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 TMTC3Q6ZXV5 915 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 GIMAP8Q8ND71 665 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 BANK1Q8NDB2 785 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 TRAPPC12Q8WVT3 735 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 IL17RAQ96F46 866 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 UIMC1Q96RL1 719 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 LRFN3Q9BTN0 628 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 JADE2Q9NQC1 790 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 ERAP1Q9NZ08 941 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 TUBE1Q9UJT0 475 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 UBIAD1Q9Y5Z9 338 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 CDY2AQ9Y6F7 541 aa9.87□□□□□ -0.83
CTDNEP1-203ENST00000570385 H3BNC9 293 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 ENPP3O14638 875 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 CALM1P0DP23 149 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 CALM2P0DP24 149 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 CALM3P0DP25 149 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 ARP10275 920 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 INSRRP14616 1297 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 SSTR3P32745 418 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 CTNNB1P35222 781 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 LIFRP42702 1097 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 MGAT3Q09327 533 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 PTPROQ16827 1216 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 LEXMQ3ZCV2 418 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 WWC2Q6AWC2 1192 aa9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 PTCRAQ6ISU1 281 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-203ENST00000570385 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms