RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 UBA1P22314 1058 aaKnown RBP12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 NAALADL2Q58DX5 795 aa12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 FRMD5Q7Z6J6 570 aa12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 TMEM105Q8N8V8 129 aa12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 KLHL23Q8NBE8 558 aa12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 POF1BQ8WVV4 589 aa12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 TTC14Q96N46 770 aa12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 EHMT1Q9H9B1 1298 aa12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 SETD4Q9NVD3 440 aa12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 FNDC1Q4ZHG4 1894 aaPredicted RBP12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 ZNF292O60281 2723 aa12.2□□□□□ -0.46
CTDNEP1-202ENST00000570380 HSPD1P10809 573 aaKnown RBP12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 GHRP10912 638 aa12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 MYCLP12524 364 aaPredicted RBP12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 ADAM17P78536 824 aa12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 GPATCH4Q5T3I0 446 aaKnown RBP12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 ADSSL1Q8N142 457 aa12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 VN1R2Q8NFZ6 395 aa12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 ATP8B4Q8TF62 1192 aa12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 GPKOWQ92917 476 aaPredicted RBP eCLIP12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 NKD2Q969F2 451 aaPredicted RBP12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 GPATCH3Q96I76 525 aa12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 PDCD2LQ9BRP1 358 aa12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 TLE6Q9H808 572 aa12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
CTDNEP1-202ENST00000570380 MED19A0JLT2 244 aaPredicted RBP12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 OPLAHO14841 1288 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 PER2O15055 1255 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 CFBP00751 764 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 GNAT1P11488 350 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 LPIN1Q14693 890 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 QRICH1Q2TAL8 776 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 VSIG10LQ86VR7 867 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 ADGRF4Q8IZF3 695 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 CRIPAKQ8N1N5 446 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 LMBR1Q8WVP7 490 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 MLXIPQ9HAP2 919 aa12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 MRPL11Q9Y3B7 192 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-202ENST00000570380 PPFIA3O75145 1194 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 TGFB3P10600 412 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 MS4A1P11836 297 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 HSD17B4P51659 736 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 MGAT3Q09327 533 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 ALX1Q15699 326 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 ZBTB33Q86T24 672 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 RTN4RL1Q86UN2 441 aaPredicted RBP12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 CMTR2Q8IYT2 770 aaKnown RBP12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 KREMEN2Q8NCW0 462 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 IL31RAQ8NI17 732 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 LINC01599Q8WXQ3 324 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 USP26Q9BXU7 913 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 S1PR5Q9H228 398 aa12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 EP300Q09472 2414 aaPredicted RBP12.17□□□□□ -0.46
CTDNEP1-202ENST00000570380 CCDC171Q6TFL3 1326 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 KMT2BQ9UMN6 2715 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 KRT37O76014 449 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 FGAP02671 866 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 SP100P23497 879 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 ARHGAP4P98171 946 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 GHRHRQ02643 423 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 PGM5Q15124 567 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 PAN2Q504Q3 1202 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 RUFY4Q6ZNE9 571 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 STOX1Q6ZVD7 989 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 TRIM50Q86XT4 487 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 NEK1Q96PY6 1258 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 JMJD4Q9H9V9 463 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 TELO2Q9Y4R8 837 aa12.16□□□□□ -0.46
CTDNEP1-202ENST00000570380 BAZ2BQ9UIF8 2168 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 BRD1O95696 1058 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 GATMP50440 423 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 KCNC3Q14003 757 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 DUSP6Q16828 381 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 FBXO47Q5MNV8 452 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 MCTP2Q6DN12 878 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 SYCE2Q6PIF2 218 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 UBALD2Q8IYN6 164 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 MICAL1Q8TDZ2 1067 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 GPR20Q99678 358 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 ZKSCAN3Q9BRR0 538 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 APOL5Q9BWW9 433 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 SMOC2Q9H3U7 446 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 AGO3Q9H9G7 860 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 VAT1LQ9HCJ6 419 aa12.15□□□□□ -0.46
CTDNEP1-202ENST00000570380 TTC41PQ6P2S7 1318 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 NOP56O00567 594 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 HOXA13P31271 388 aaPredicted RBP12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 ERVFC1P60507 584 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 HAND2P61296 217 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 MTMR3Q13615 1198 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 UTP14CQ5TAP6 766 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 ANKRD54Q6NXT1 300 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 TMEM184AQ6ZMB5 413 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 TSHZ1Q6ZSZ6 1077 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 NPAS4Q8IUM7 802 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms