RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 TLL2Q9Y6L7 1015 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 MCM3APO60318 1980 aa11.31□□□□□ -0.6
GDE1-205ENST00000569899 FRMPD4Q14CM0 1322 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 FAM237AA0A1B0GTK4 181 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 FAM86B1E9PN63 330 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 FAM86B2P0C5J1 330 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 PRPHP41219 470 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 USP11P51784 963 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
GDE1-205ENST00000569899 RGMBQ6NW40 437 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 MOXD1Q6UVY6 613 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 ANKRD23Q86SG2 305 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 ADAMTS19Q8TE59 1207 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 GJA10Q969M2 543 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 LENG9Q96B70 501 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 MBOAT7Q96N66 472 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 MTMR9Q96QG7 549 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 NAP1L4Q99733 375 aaKnown RBP11.3□□□□□ -0.6
GDE1-205ENST00000569899 PTPN18Q99952 460 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 MOV10L1Q9BXT6 1211 aaKnown RBP11.3□□□□□ -0.6
GDE1-205ENST00000569899 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 R3HDMLQ9H3Y0 253 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 CLSTN2Q9H4D0 955 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 A1CFQ9NQ94 594 aaKnown RBP11.3□□□□□ -0.6
GDE1-205ENST00000569899 PCDHB9Q9Y5E1 797 aa11.3□□□□□ -0.6
GDE1-205ENST00000569899 CYP3A7-CYP3A51PA0A087WV96 503 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 SYCE3A1L190 88 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 PP2D1A8MPX8 630 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 KINO60870 393 aaKnown RBP11.29□□□□□ -0.6
GDE1-205ENST00000569899 CYP3A4P08684 503 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 CYP3A7P24462 503 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 CIITAP33076 1130 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 SYKP43405 635 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 FOXC1Q12948 553 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 CAMK4Q16566 473 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 PRR16Q569H4 304 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 NCAPG2Q86XI2 1143 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 SAMD3Q8N6K7 520 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 CHST13Q8NET6 341 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 FAM174AQ8TBP5 190 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 SMCR8Q8TEV9 937 aaPredicted RBP11.29□□□□□ -0.6
GDE1-205ENST00000569899 EPSTI1Q96J88 318 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 TAAR1Q96RJ0 339 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 RBPJLQ9UBG7 517 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 ABT1Q9ULW3 272 aaKnown RBP11.29□□□□□ -0.6
GDE1-205ENST00000569899 SLC45A1Q9Y2W3 748 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 WDR81Q562E7 1941 aa11.29□□□□□ -0.6
GDE1-205ENST00000569899 IGLV3-22A0A075B6J6 115 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 A0A087X0B3 334 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 SIAH2O43255 324 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 TOMM70O94826 608 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 EIF2AK2P19525 551 aaKnown RBP11.28□□□□□ -0.6
GDE1-205ENST00000569899 LONP1P36776 959 aaKnown RBP11.28□□□□□ -0.6
GDE1-205ENST00000569899 TXKP42681 527 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 ERVK-9P63128 1117 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 ERVK-24P63145 666 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 TRMT44Q8IYL2 757 aaKnown RBP11.28□□□□□ -0.6
GDE1-205ENST00000569899 CYP2W1Q8TAV3 490 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 HAS1Q92839 578 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 ALG2Q9H553 416 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 KCNMB3Q9NPA1 279 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 PXMP2Q9NR77 195 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 FAM13BQ9NYF5 915 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 MAP3K20Q9NYL2 800 aaKnown RBP11.28□□□□□ -0.6
GDE1-205ENST00000569899 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 KCNH3Q9ULD8 1083 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 RABGAP1Q9Y3P9 1069 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 ZNF236Q9UL36 1845 aa11.28□□□□□ -0.6
GDE1-205ENST00000569899 FAM155AB1AL88 458 aaPredicted RBP11.27□□□□□ -0.6
GDE1-205ENST00000569899 IGF2BP3O00425 579 aaKnown RBP eCLIP11.27□□□□□ -0.6
GDE1-205ENST00000569899 ZNF202O95125 648 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 ERCC3P19447 782 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 CDC25AP30304 524 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 ZNF76P36508 570 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 PGM5Q15124 567 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 Q4G0T1 1027 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 PDILTQ8N807 584 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 ETNPPLQ8TBG4 499 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 RMDN3Q96TC7 470 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 PDCD2LQ9BRP1 358 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 TNMDQ9H2S6 317 aa11.27□□□□□ -0.6
GDE1-205ENST00000569899 ZSWIM8A7E2V4 1837 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 MGAMO43451 1857 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 MANSC4A6NHS7 340 aaPredicted RBP11.27□□□□□ -0.61
GDE1-205ENST00000569899 TMEM88BA6NKF7 163 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 POLR2DO15514 142 aaKnown RBP11.27□□□□□ -0.61
GDE1-205ENST00000569899 YY1P25490 414 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 SOX11P35716 441 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 TECP42680 631 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 ANKRD13CQ8N6S4 541 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 IGSF22Q8N9C0 903 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 ZNF784Q8NCA9 323 aaPredicted RBP11.27□□□□□ -0.61
GDE1-205ENST00000569899 GTF3C2Q8WUA4 911 aaPredicted RBP11.27□□□□□ -0.61
GDE1-205ENST00000569899 GLMNQ92990 594 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 PARK7Q99497 189 aaKnown RBP11.27□□□□□ -0.61
GDE1-205ENST00000569899 PORCNQ9H237 461 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 FBXO40Q9UH90 709 aa11.27□□□□□ -0.61
GDE1-205ENST00000569899 ASTN1O14525 1302 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms