RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 CCDC184Q52MB2 194 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 TNNI3KQ59H18 835 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 PRSS36Q5K4E3 855 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 DLK2Q6UY11 383 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 FAM214BQ7L5A3 538 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 ZDHHC13Q8IUH4 622 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 TSPYL6Q8N831 410 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 ZBTB38Q8NAP3 1195 aaPredicted RBP7.13□□□□□ -1.27
GDE1-204ENST00000569773 TBC1D16Q8TBP0 767 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 ARMC5Q96C12 935 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 HEXIM2Q96MH2 286 aaKnown RBP7.13□□□□□ -1.27
GDE1-204ENST00000569773 SLC6A18Q96N87 628 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 DNAJC2Q99543 621 aaKnown RBP7.13□□□□□ -1.27
GDE1-204ENST00000569773 DBNDD1Q9H9R9 158 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 PRDM5Q9NQX1 630 aaPredicted RBP7.13□□□□□ -1.27
GDE1-204ENST00000569773 ACTR10Q9NZ32 417 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 CNOT7Q9UIV1 285 aaKnown RBP7.13□□□□□ -1.27
GDE1-204ENST00000569773 ABT1Q9ULW3 272 aaKnown RBP7.13□□□□□ -1.27
GDE1-204ENST00000569773 BRCA2P51587 3418 aa7.13□□□□□ -1.27
GDE1-204ENST00000569773 PDE4DIPQ5VU43 2346 aa7.12□□□□□ -1.27
GDE1-204ENST00000569773 ECE2O60344 883 aa7.12□□□□□ -1.27
GDE1-204ENST00000569773 CELF2O95319 508 aaKnown RBP7.12□□□□□ -1.27
GDE1-204ENST00000569773 PCCAP05165 728 aaPredicted RBP7.12□□□□□ -1.27
GDE1-204ENST00000569773 IGKV5-2P06315 115 aa7.12□□□□□ -1.27
GDE1-204ENST00000569773 VIL1P09327 827 aaKnown RBP7.12□□□□□ -1.27
GDE1-204ENST00000569773 MAP2K2P36507 400 aa7.12□□□□□ -1.27
GDE1-204ENST00000569773 CCNFP41002 786 aa7.12□□□□□ -1.27
GDE1-204ENST00000569773 CHMP4BP1P59074 171 aa7.12□□□□□ -1.27
GDE1-204ENST00000569773 ZNF746Q6NUN9 644 aaPredicted RBP7.12□□□□□ -1.27
GDE1-204ENST00000569773 CKAP2LQ8IYA6 745 aa7.12□□□□□ -1.27
GDE1-204ENST00000569773 CCDC191Q8NCU4 936 aa7.12□□□□□ -1.27
GDE1-204ENST00000569773 UBXN4Q92575 508 aa7.12□□□□□ -1.27
GDE1-204ENST00000569773 ZNF512BQ96KM6 892 aaPredicted RBP7.12□□□□□ -1.27
GDE1-204ENST00000569773 GPR101Q96P66 508 aaPredicted RBP7.12□□□□□ -1.27
GDE1-204ENST00000569773 METTL22Q9BUU2 404 aaPredicted RBP7.12□□□□□ -1.27
GDE1-204ENST00000569773 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.12□□□□□ -1.27
GDE1-204ENST00000569773 TMX4Q9H1E5 349 aaPredicted RBP7.12□□□□□ -1.27
GDE1-204ENST00000569773 R3HCC1Q9Y3T6 440 aaKnown RBP7.12□□□□□ -1.27
GDE1-204ENST00000569773 PAPPA2Q9BXP8 1791 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 WTIPA6NIX2 430 aaPredicted RBP7.11□□□□□ -1.27
GDE1-204ENST00000569773 FAM155AB1AL88 458 aaPredicted RBP7.11□□□□□ -1.27
GDE1-204ENST00000569773 ELL2O00472 640 aaPredicted RBP7.11□□□□□ -1.27
GDE1-204ENST00000569773 CLEC3AO75596 197 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 RPS12P25398 132 aaKnown RBP7.11□□□□□ -1.27
GDE1-204ENST00000569773 ECE1P42892 770 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 SFRP5Q5T4F7 317 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 LARP1BQ659C4 914 aaKnown RBP7.11□□□□□ -1.27
GDE1-204ENST00000569773 FAM181AQ8N9Y4 354 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 KREMEN1Q96MU8 473 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 MYD88Q99836 296 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 LRRC4CQ9HCJ2 640 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 GTF2IRD1Q9UHL9 959 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 PCDHB10Q9UN67 800 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 MAPK8IP1Q9UQF2 711 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 SLC12A7Q9Y666 1083 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 U3KQE9 123 aa7.11□□□□□ -1.27
GDE1-204ENST00000569773 ASTN2O75129 1339 aaPredicted RBP7.1□□□□□ -1.27
GDE1-204ENST00000569773 PRR33A8MZF0 331 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 H7C1D1 291 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 KLF4O43474 513 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 PDE8AO60658 829 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 CBX7O95931 251 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 CYP7A1P22680 504 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 ZNF280AP59817 542 aaPredicted RBP7.1□□□□□ -1.27
GDE1-204ENST00000569773 CALD1Q05682 793 aaKnown RBP7.1□□□□□ -1.27
GDE1-204ENST00000569773 RBL2Q08999 1139 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 TBC1D10BQ4KMP7 808 aaPredicted RBP7.1□□□□□ -1.27
GDE1-204ENST00000569773 TDRD10Q5VZ19 366 aaKnown RBP7.1□□□□□ -1.27
GDE1-204ENST00000569773 RNF141Q8WVD5 230 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 DHRS1Q96LJ7 313 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 FAM86C1Q9NVL1 165 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 CWC25Q9NXE8 425 aaPredicted RBP7.1□□□□□ -1.27
GDE1-204ENST00000569773 MAP3K2Q9Y2U5 619 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 LEMD3Q9Y2U8 911 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 ARAP2Q8WZ64 1704 aa7.1□□□□□ -1.27
GDE1-204ENST00000569773 PI4KAP2A4QPH2 592 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 PRR19A6NJB7 356 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 C9IYK1 514 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 ADM5C9JUS6 153 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 IGSF3O75054 1194 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 UFL1O94874 794 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 TGFB1P01137 390 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 ITGB7P26010 798 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 CTSWP56202 376 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 CPSF6Q16630 551 aaKnown RBP eCLIP7.09□□□□□ -1.27
GDE1-204ENST00000569773 CCDC152Q4G0S7 254 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 CCDC30Q5VVM6 783 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 KSR2Q6VAB6 950 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 G2E3Q7L622 706 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 PPFIBP1Q86W92 1011 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 CELF2-AS1Q8N7Q2 184 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 PI4KAP1Q8N8J0 262 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 TTLL11Q8NHH1 800 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 TSR2Q969E8 191 aaKnown RBP7.09□□□□□ -1.27
GDE1-204ENST00000569773 VWCEQ96DN2 955 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 EYA3Q99504 573 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 TRIM55Q9BYV6 548 aa7.09□□□□□ -1.27
GDE1-204ENST00000569773 SUCOQ9UBS9 1254 aaKnown RBP7.09□□□□□ -1.27
GDE1-204ENST00000569773 MED23Q9ULK4 1368 aa7.08□□□□□ -1.28
GDE1-204ENST00000569773 XDHP47989 1333 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms