RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CCDC69A6NI79 296 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 TIMM10P62072 90 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 ICA1Q05084 483 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 STK3Q13188 491 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 PDE1CQ14123 709 aaPredicted RBP7.35□□□□□ -1.23
SMG1-217ENST00000569764 NONOQ15233 471 aaKnown RBP eCLIP7.35□□□□□ -1.23
SMG1-217ENST00000569764 SEPT7Q16181 437 aaKnown RBP7.35□□□□□ -1.23
SMG1-217ENST00000569764 MUM1Q2TAK8 710 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 FIP1L1Q6UN15 594 aaKnown RBP7.35□□□□□ -1.23
SMG1-217ENST00000569764 TMEM199Q8N511 208 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 CLMNQ96JQ2 1002 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 DBNDD2Q9BQY9 259 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 KATNAL1Q9BW62 490 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 UPF3BQ9BZI7 483 aaKnown RBP7.35□□□□□ -1.23
SMG1-217ENST00000569764 EPB41L4AQ9HCS5 686 aaPredicted RBP7.35□□□□□ -1.23
SMG1-217ENST00000569764 ECHDC1Q9NTX5 307 aa7.35□□□□□ -1.23
SMG1-217ENST00000569764 A0A1B0GUL7 405 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 H0YC42 278 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 SGSM2O43147 1006 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 RANBP6O60518 1105 aaKnown RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 GJB1P08034 283 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 HSPA8P11142 646 aaKnown RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 BECN1Q14457 450 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ADCK5Q3MIX3 580 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 MILR1Q7Z6M3 343 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 TRIM42Q8IWZ5 723 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 SPICE1Q8N0Z3 855 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ASIC4Q96FT7 647 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 UBE2OQ9C0C9 1292 aaKnown RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 COPRSQ9NQ92 184 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 EIF2B4Q9UI10 523 aaKnown RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 ZDHHC9Q9Y397 364 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 MRPL11Q9Y3B7 192 aaKnown RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 A0A0D9SFI3 127 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ZBBXA8MT70 800 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 PRRT4C9JH25 899 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 MYCP01106 439 aaPredicted RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 GYG1P46976 350 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ZRSR1Q15695 479 aaKnown RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 RAB30Q15771 203 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 SLC9C2Q5TAH2 1124 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 RTL10Q7L3V2 364 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 CCDC91Q7Z6B0 441 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ZNF589Q86UQ0 364 aaPredicted RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 RASSF8Q8NHQ8 419 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 USP33Q8TEY7 942 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 CDK5RAP3Q96JB5 506 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 AGAP3Q96P47 875 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 SEC62Q99442 399 aaKnown RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 MKNK1Q9BUB5 465 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ETAA1Q9NY74 926 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ATP8A1Q9Y2Q0 1164 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 PCDHGA4Q9Y5G9 962 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 SLC4A4Q9Y6R1 1079 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ZNF541Q9H0D2 1346 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 RPAP1Q9BWH6 1393 aaPredicted RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 USP17L12C9JPN9 530 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ADM5C9JUS6 153 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 USP17L21D6R901 530 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 BIN1O00499 593 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 MBD4O95243 580 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 CALM1P0DP23 149 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 CALM2P0DP24 149 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 CALM3P0DP25 149 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 SSTR3P32745 418 aaPredicted RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 DMPKQ09013 629 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 COG2Q14746 738 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 MAP3K11Q16584 847 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 FAM133BQ5BKY9 247 aaKnown RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 SLC51AQ86UW1 340 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 SLC44A2Q8IWA5 706 aaPredicted RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 MYOCDQ8IZQ8 938 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 TNIP2Q8NFZ5 429 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 ZDHHC15Q96MV8 337 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 TRERF1Q96PN7 1200 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 BARD1Q99728 777 aaKnown RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 BAG1Q99933 345 aaPredicted RBP7.34□□□□□ -1.23
SMG1-217ENST00000569764 MYH3P11055 1940 aa7.34□□□□□ -1.23
SMG1-217ENST00000569764 TCHHQ07283 1943 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 WTIPA6NIX2 430 aaPredicted RBP7.34□□□□□ -1.24
SMG1-217ENST00000569764 SNAP23O00161 211 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 SART1O43290 800 aaKnown RBP7.34□□□□□ -1.24
SMG1-217ENST00000569764 CDKL5O76039 1030 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 RBL2Q08999 1139 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 SPP2Q13103 211 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 MYBPC3Q14896 1274 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 CCNG2Q16589 344 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 ZNF697Q5TEC3 545 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 THOC1Q96FV9 657 aaKnown RBP7.34□□□□□ -1.24
SMG1-217ENST00000569764 ZMAT2Q96NC0 199 aaKnown RBP7.34□□□□□ -1.24
SMG1-217ENST00000569764 FTOQ9C0B1 505 aaKnown RBP eCLIP7.34□□□□□ -1.24
SMG1-217ENST00000569764 TGIF2Q9GZN2 237 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 C12orf49Q9H741 205 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 CLIP2Q9UDT6 1046 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 STX8Q9UNK0 236 aa7.34□□□□□ -1.24
SMG1-217ENST00000569764 AOX1Q06278 1338 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 PDHXO00330 501 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 REC8O95072 547 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 SLC1A4P43007 532 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 PPIGQ13427 754 aaKnown RBP eCLIP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms