RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 BAIAP3O94812 1187 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 EEF2P13639 858 aaKnown RBP7.07□□□□□ -1.28
CDH13-212ENST00000569144 AKR1B1P15121 316 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 PSMC6P62333 389 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 OCLNQ16625 522 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 FAM83BQ5T0W9 1011 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 NOL8Q76FK4 1167 aaKnown RBP7.07□□□□□ -1.28
CDH13-212ENST00000569144 ANKRD35Q8N283 1001 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 PRSS33Q8NF86 280 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 NEK9Q8TD19 979 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 CCDC17Q96LX7 622 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 SLF1Q9BQI6 1058 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 CRNKL1Q9BZJ0 848 aaKnown RBP7.07□□□□□ -1.28
CDH13-212ENST00000569144 AP5M1Q9H0R1 490 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 PRKAG3Q9UGI9 489 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 FBXO40Q9UH90 709 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 PCDHGC4Q9Y5F7 938 aa7.07□□□□□ -1.28
CDH13-212ENST00000569144 GPC6Q9Y625 555 aaPredicted RBP7.07□□□□□ -1.28
CDH13-212ENST00000569144 COL11A1P12107 1806 aaPredicted RBP7.06□□□□□ -1.28
CDH13-212ENST00000569144 TNKSO95271 1327 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 USP34Q70CQ2 3546 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 PNMA6EA0A0J9YXQ4 647 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 LCHNA4D1U4 455 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 E9PSI1 815 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 DYNC1LI2O43237 492 aaPredicted RBP7.06□□□□□ -1.28
CDH13-212ENST00000569144 CYP2C9P11712 490 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 KCNJ6P48051 423 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 ERVK-21P61565 698 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 ZP2Q05996 745 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 CHST13Q8NET6 341 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 ANKS1AQ92625 1134 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 DYNLL2Q96FJ2 89 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 HSH2DQ96JZ2 352 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 PRRX2Q99811 253 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 UPF3BQ9BZI7 483 aaKnown RBP7.06□□□□□ -1.28
CDH13-212ENST00000569144 FTOQ9C0B1 505 aaKnown RBP eCLIP7.06□□□□□ -1.28
CDH13-212ENST00000569144 KANSL2Q9H9L4 492 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 SUGCTQ9HAC7 445 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 DCP1AQ9NPI6 582 aaPredicted RBP7.06□□□□□ -1.28
CDH13-212ENST00000569144 TRMT13Q9NUP7 481 aaKnown RBP7.06□□□□□ -1.28
CDH13-212ENST00000569144 NDFIP2Q9NV92 336 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 ATXN7L1Q9ULK2 861 aaPredicted RBP7.06□□□□□ -1.28
CDH13-212ENST00000569144 NOB1Q9ULX3 412 aaKnown RBP7.06□□□□□ -1.28
CDH13-212ENST00000569144 FAM50BQ9Y247 325 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 Q9Y3F1 56 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 NAV1Q8NEY1 1877 aa7.06□□□□□ -1.28
CDH13-212ENST00000569144 DCDC2BA2VCK2 349 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 ASB14A6NK59 587 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 KHNYNO15037 678 aaKnown RBP7.05□□□□□ -1.28
CDH13-212ENST00000569144 ZBED4O75132 1171 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 IQCF3P0C7M6 154 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 CYP2D6P10635 497 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 MX2P20592 715 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 WDR5P61964 334 aaKnown RBP7.05□□□□□ -1.28
CDH13-212ENST00000569144 INSM1Q01101 510 aaPredicted RBP7.05□□□□□ -1.28
CDH13-212ENST00000569144 PKN1Q16512 942 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 RTN1Q16799 776 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 BMP8AQ7Z5Y6 402 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 ADHFE1Q8IWW8 467 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 FAM133AQ8N9E0 248 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 PRPF38AQ8NAV1 312 aaKnown RBP7.05□□□□□ -1.28
CDH13-212ENST00000569144 SDR42E1Q8WUS8 393 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 SUSD3Q96L08 255 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 TGS1Q96RS0 853 aaKnown RBP7.05□□□□□ -1.28
CDH13-212ENST00000569144 MKNK1Q9BUB5 465 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 ANTXR1Q9H6X2 564 aa7.05□□□□□ -1.28
CDH13-212ENST00000569144 DBNLQ9UJU6 430 aaKnown RBP7.05□□□□□ -1.28
CDH13-212ENST00000569144 CTDP1Q9Y5B0 961 aaPredicted RBP7.05□□□□□ -1.28
CDH13-212ENST00000569144 MYO5AQ9Y4I1 1855 aaKnown RBP7.04□□□□□ -1.28
CDH13-212ENST00000569144 CARNS1A5YM72 827 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 H3BQ06 376 aaPredicted RBP7.04□□□□□ -1.28
CDH13-212ENST00000569144 GJB5O95377 273 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 GNAI2P04899 355 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 FGFR3P22607 806 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 IRS1P35568 1242 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 CDK8P49336 464 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 OAZ1P54368 228 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 CNTN2Q02246 1040 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 TCF15Q12870 199 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 BFSP2Q13515 415 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 LRRFIP1Q32MZ4 808 aaKnown RBP7.04□□□□□ -1.28
CDH13-212ENST00000569144 HERC4Q5GLZ8 1057 aaPredicted RBP7.04□□□□□ -1.28
CDH13-212ENST00000569144 SAMD5Q5TGI4 173 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 IQSEC1Q6DN90 963 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 CPXCR1Q8N123 301 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 RETREG2Q8NC44 543 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDH13-212ENST00000569144 NUP88Q99567 741 aaPredicted RBP7.04□□□□□ -1.28
CDH13-212ENST00000569144 RAD9AQ99638 391 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 SLC38A10Q9HBR0 1119 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 RAVER2Q9HCJ3 691 aaKnown RBP7.04□□□□□ -1.28
CDH13-212ENST00000569144 TLR7Q9NYK1 1049 aaKnown RBP7.04□□□□□ -1.28
CDH13-212ENST00000569144 CTNNA3Q9UI47 895 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 MTUS1Q9ULD2 1270 aa7.04□□□□□ -1.28
CDH13-212ENST00000569144 LINC01553A4QN01 128 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 CT47B1P0C2W7 299 aaPredicted RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 FAM157BP0CG42 384 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 MAPTP10636 758 aaKnown RBP7.03□□□□□ -1.28
CDH13-212ENST00000569144 PDE6AP16499 860 aa7.03□□□□□ -1.28
CDH13-212ENST00000569144 PTGS1P23219 599 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms