RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	ATP9A	O75110	1047 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	BAIAP3	O94812	1187 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	RPLP2	P05387	115 aa	Known RBP	11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	CKB	P12277	381 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	KCNA2	P16389	499 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	ATP2A2	P16615	1042 aa	Known RBP	11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	SEMA3F	Q13275	785 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	TYW1B	Q6NUM6	668 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	NIPA1	Q7RTP0	329 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	PLA2G4D	Q86XP0	818 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	FAM177A1	Q8N128	213 aa	Predicted RBP	11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	PGBD1	Q96JS3	809 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	SLC9A7	Q96T83	725 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	RNPEP	Q9H4A4	650 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	NCOA5	Q9HCD5	579 aa	Known RBP	11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	TMEM260	Q9NX78	707 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	NFASC	O94856	1347 aa		11.8	□□□□□ -0.52
UBR1-207	ENST00000568782	GBF1	Q92538	1859 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	RSPH10B2	B2RC85	870 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	CAND2	O75155	1236 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	RSPH10B	P0C881	870 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	CLK2	P49760	499 aa	Known RBP	11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	IKBKE	Q14164	716 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	NTRK3	Q16288	839 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	PKN1	Q16512	942 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	FAM160B1	Q5W0V3	765 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	GALNT17	Q6IS24	598 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	PHOSPHO2	Q8TCD6	241 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	WASF1	Q92558	559 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	GAS2L1	Q99501	681 aa	Predicted RBP	11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	ZNF577	Q9BSK1	485 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	ZBED2	Q9BTP6	218 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	ZNF576	Q9H609	170 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	TBC1D22B	Q9NU19	505 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	VPS54	Q9P1Q0	977 aa		11.79	□□□□□ -0.52
UBR1-207	ENST00000568782	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	RRN3P2	A6NIE6	340 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782		M0QZ92	97 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	MEIS1	O00470	390 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	BACH1	O14867	736 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	PPFIA3	O75145	1194 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	CYP3A4	P08684	503 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	MARK3	P27448	753 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	SLC26A2	P50443	739 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	RBL2	Q08999	1139 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	PPFIA1	Q13136	1202 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	RASIP1	Q5U651	963 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	TAF2	Q6P1X5	1199 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	CNKSR3	Q6P9H4	555 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	SERINC5	Q86VE9	423 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	SLC17A8	Q8NDX2	589 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	LARP6	Q9BRS8	491 aa	Known RBP	11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	PBX4	Q9BYU1	374 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	BCAS3	Q9H6U6	928 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	AGO4	Q9HCK5	861 aa	Known RBP	11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	SETD4	Q9NVD3	440 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	TRPC6	Q9Y210	931 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	SAMM50	Q9Y512	469 aa		11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	LAMA2	P24043	3122 aa	Known RBP	11.78	□□□□□ -0.52
UBR1-207	ENST00000568782	TET1	Q8NFU7	2136 aa		11.77	□□□□□ -0.52
UBR1-207	ENST00000568782	GSTTP1	A0A1W2PQM5	241 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	GRXCR1	A8MXD5	290 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	DDX39A	O00148	427 aa	Known RBP	11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	IPO5	O00410	1097 aa	Known RBP	11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	TREH	O43280	583 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	AR	P10275	920 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	STAT5B	P51692	787 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	USP11	P51784	963 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	NEK4	P51957	841 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	ACTR2	P61160	394 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	ZNF200	P98182	395 aa	Predicted RBP	11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	GRIK4	Q16099	956 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	ZNF618	Q5T7W0	954 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	MIS18BP1	Q6P0N0	1132 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	PLPPR4	Q7Z2D5	763 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	TRIM50	Q86XT4	487 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	CKAP2L	Q8IYA6	745 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	CYP2W1	Q8TAV3	490 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	CDX2	Q99626	313 aa	Predicted RBP	11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	BRMS1	Q9HCU9	246 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	PCDHA4	Q9UN74	947 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	PCDHA11	Q9Y5I1	949 aa		11.77	□□□□□ -0.53
UBR1-207	ENST00000568782	LAMA3	Q16787	3333 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	CCDC194	A0A1B0GVG4	234 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	LGR5	O75473	907 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	FOSL2	P15408	326 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	IGBP1	P78318	339 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	KRT76	Q01546	638 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	TRIM29	Q14134	588 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	PRR16	Q569H4	304 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	PPP2R2D	Q66LE6	453 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	BLID	Q8IZY5	108 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	LMBR1	Q8WVP7	490 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	SEPT8	Q92599	483 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	DHX38	Q92620	1227 aa	Known RBP	11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	UPF2	Q9HAU5	1272 aa	Known RBP	11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	TUBE1	Q9UJT0	475 aa		11.76	□□□□□ -0.53
UBR1-207	ENST00000568782	POTEB3	A0JP26	581 aa		11.75	□□□□□ -0.53
UBR1-207	ENST00000568782	FAM86B1	E9PN63	330 aa		11.75	□□□□□ -0.53

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