RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 RUFY2Q8WXA3 655 aa18.17■□□□□ 0.5
HERPUD1-215ENST00000568676 CDHR1Q96JP9 859 aa18.17■□□□□ 0.5
HERPUD1-215ENST00000568676 MAP3K14Q99558 947 aa18.17■□□□□ 0.5
HERPUD1-215ENST00000568676 POTEB3A0JP26 581 aa18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 H3BQ06 376 aaPredicted RBP18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 PIK3CDO00329 1044 aa18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 SMARCA1P28370 1054 aa18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 ARHGAP4P98171 946 aa18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 SLC35G1Q2M3R5 365 aa18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 POTEBQ6S5H4 581 aa18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 ADHFE1Q8IWW8 467 aa18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 NCOA7Q8NI08 942 aa18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 SMARCC2Q8TAQ2 1214 aa18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 POP1Q99575 1024 aaKnown RBP18.16■□□□□ 0.5
HERPUD1-215ENST00000568676 C19orf67A6NJJ6 358 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 CTNNB1P35222 781 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 BMPR1AP36894 532 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 ZP2Q05996 745 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 SEMA3FQ13275 785 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 CLP1Q92989 425 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 PLVAPQ9BX97 442 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 SPZ1Q9BXG8 430 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 BCAS3Q9H6U6 928 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 EHMT1Q9H9B1 1298 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 CLDND1Q9NY35 253 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 RTEL1Q9NZ71 1219 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 ADGRA3Q8IWK6 1321 aa18.15■□□□□ 0.5
HERPUD1-215ENST00000568676 IGHDP01880 384 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 CYP21A2P08686 494 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 KIF5BP33176 963 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 CTC1Q2NKJ3 1217 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 UTP14CQ5TAP6 766 aaKnown RBP18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 FAM43BQ6ZT52 329 aaPredicted RBP18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 EP400NLQ6ZTU2 488 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 TRIM50Q86XT4 487 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 TNPO1Q92973 898 aaKnown RBP18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 GPRASP2Q96D09 838 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 LZTS2Q9BRK4 669 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 ERAP1Q9NZ08 941 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 NLRC5Q86WI3 1866 aa18.14■□□□□ 0.49
HERPUD1-215ENST00000568676 MAFGO15525 162 aa18.13■□□□□ 0.49
HERPUD1-215ENST00000568676 CHRNA1P02708 482 aa18.13■□□□□ 0.49
HERPUD1-215ENST00000568676 TCF7P36402 384 aaPredicted RBP18.13■□□□□ 0.49
HERPUD1-215ENST00000568676 CTCFLQ8NI51 663 aaPredicted RBP18.13■□□□□ 0.49
HERPUD1-215ENST00000568676 PPP2R3CQ969Q6 453 aa18.13■□□□□ 0.49
HERPUD1-215ENST00000568676 MTA3Q9BTC8 594 aa18.13■□□□□ 0.49
HERPUD1-215ENST00000568676 OSBPL7Q9BZF2 842 aa18.13■□□□□ 0.49
HERPUD1-215ENST00000568676 SEC63Q9UGP8 760 aaKnown RBP18.13■□□□□ 0.49
HERPUD1-215ENST00000568676 SQORQ9Y6N5 450 aa18.13■□□□□ 0.49
HERPUD1-215ENST00000568676 DDAH1O94760 285 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 GNAQP50148 359 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 MGAT3Q09327 533 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 PPFIA1Q13136 1202 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 SMAD2Q15796 467 aaKnown RBP18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 NAALADL2Q58DX5 795 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 SEPT1Q8WYJ6 367 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 P2RX5Q93086 422 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 ZNF689Q96CS4 500 aaPredicted RBP18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 UIMC1Q96RL1 719 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 FTHL17Q9BXU8 183 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 IL25Q9H293 177 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 RC3H2Q9HBD1 1191 aaKnown RBP18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 TUBE1Q9UJT0 475 aa18.12■□□□□ 0.49
HERPUD1-215ENST00000568676 MBLAC1A4D2B0 266 aaPredicted RBP18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 E7EWF7 191 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 ENPP3O14638 875 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 MEIS2O14770 477 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 MMP1P03956 469 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 LINC00271P0C7V0 271 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 GHRP10912 638 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 LTBRP36941 435 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 BTG3Q14201 252 aaPredicted RBP18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 LPIN1Q14693 890 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 TSHZ1Q6ZSZ6 1077 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 SMARCAD1Q9H4L7 1026 aa18.11■□□□□ 0.49
HERPUD1-215ENST00000568676 RRN3P2A6NIE6 340 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 DGKIO75912 1065 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 SP4Q02446 784 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 SMAD4Q13485 552 aaKnown RBP18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 GRIK4Q16099 956 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 FBXO47Q5MNV8 452 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 IER5Q5VY09 327 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 USP17L6PQ6QN14 398 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 TMTC2Q8N394 836 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 IGDCC4Q8TDY8 1250 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 SENP2Q9HC62 589 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 PIEZO1Q92508 2521 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 MUC6Q6W4X9 2439 aa18.1■□□□□ 0.49
HERPUD1-215ENST00000568676 GRM6O15303 877 aa18.09■□□□□ 0.49
HERPUD1-215ENST00000568676 KCNA2P16389 499 aa18.09■□□□□ 0.49
HERPUD1-215ENST00000568676 HYAL1Q12794 435 aa18.09■□□□□ 0.49
HERPUD1-215ENST00000568676 TTC22Q5TAA0 569 aa18.09■□□□□ 0.49
HERPUD1-215ENST00000568676 RUFY4Q6ZNE9 571 aa18.09■□□□□ 0.49
HERPUD1-215ENST00000568676 TEX2Q8IWB9 1127 aa18.09■□□□□ 0.49
HERPUD1-215ENST00000568676 ZNF654Q8IZM8 581 aa18.09■□□□□ 0.49
HERPUD1-215ENST00000568676 GLG1Q92896 1179 aa18.09■□□□□ 0.49
HERPUD1-215ENST00000568676 MFSD14AQ96MC6 490 aa18.09■□□□□ 0.49
HERPUD1-215ENST00000568676 M0QZ92 97 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms