RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 KAT2BQ92831 832 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 USP28Q96RU2 1077 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 PCYT2Q99447 389 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 CLIC4Q9Y696 253 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 IGKV6D-21A0A0A0MT36 114 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 KBTBD13C9JR72 458 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 NOP56O00567 594 aaKnown RBP20.31■□□□□ 0.84
COMMD4-222ENST00000568034 PPFIA4O75335 1185 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 LGALS2P05162 132 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 MYL3P08590 195 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 ZNF286BP0CG31 522 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 TCF7P36402 384 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-222ENST00000568034 PTPAQ15257 358 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 SF3A1Q15459 793 aaKnown RBP20.31■□□□□ 0.84
COMMD4-222ENST00000568034 IL17AQ16552 155 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 DGKDQ16760 1214 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 ABHD15Q6UXT9 468 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 TRIM50Q86XT4 487 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 IPO9Q96P70 1041 aaKnown RBP20.31■□□□□ 0.84
COMMD4-222ENST00000568034 C16orf70Q9BSU1 422 aa20.31■□□□□ 0.84
COMMD4-222ENST00000568034 A0A1W2PQ45 241 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-222ENST00000568034 A0A1W2PQY0 241 aa20.3■□□□□ 0.84
COMMD4-222ENST00000568034 EML1O00423 815 aa20.3■□□□□ 0.84
COMMD4-222ENST00000568034 CHMP2AO43633 222 aa20.3■□□□□ 0.84
COMMD4-222ENST00000568034 ZEB2O60315 1214 aa20.3■□□□□ 0.84
COMMD4-222ENST00000568034 LGR5O75473 907 aa20.3■□□□□ 0.84
COMMD4-222ENST00000568034 BAG4O95429 457 aaKnown RBP20.3■□□□□ 0.84
COMMD4-222ENST00000568034 F2P00734 622 aa20.3■□□□□ 0.84
COMMD4-222ENST00000568034 SUPT20HL2P0C7V6 817 aa20.3■□□□□ 0.84
COMMD4-222ENST00000568034 BRDTQ58F21 947 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-222ENST00000568034 PAWRQ96IZ0 340 aaKnown RBP20.3■□□□□ 0.84
COMMD4-222ENST00000568034 TTC12Q9H892 705 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-222ENST00000568034 POLR3EQ9NVU0 708 aa20.3■□□□□ 0.84
COMMD4-222ENST00000568034 DAXXQ9UER7 740 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-222ENST00000568034 EMSYQ7Z589 1322 aa20.29■□□□□ 0.84
COMMD4-222ENST00000568034 WDR64B1ANS9 1081 aa20.29■□□□□ 0.84
COMMD4-222ENST00000568034 LAD1O00515 517 aa20.29■□□□□ 0.84
COMMD4-222ENST00000568034 KPNA6O60684 536 aa20.29■□□□□ 0.84
COMMD4-222ENST00000568034 TXKP42681 527 aa20.29■□□□□ 0.84
COMMD4-222ENST00000568034 NASPP49321 788 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-222ENST00000568034 NUCB2P80303 420 aa20.29■□□□□ 0.84
COMMD4-222ENST00000568034 CCDC60Q8IWA6 550 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-222ENST00000568034 SMAP1Q8IYB5 467 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-222ENST00000568034 FERMT2Q96AC1 680 aa20.29■□□□□ 0.84
COMMD4-222ENST00000568034 CHAMP1Q96JM3 812 aa20.29■□□□□ 0.84
COMMD4-222ENST00000568034 MTG1Q9BT17 334 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-222ENST00000568034 CIZ1Q9ULV3 898 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-222ENST00000568034 GRIN2DO15399 1336 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 WDR81Q562E7 1941 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 HAS3O00219 553 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 MARCH6O60337 910 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 PRPHP41219 470 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 JAK3P52333 1124 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 FOXD4L6Q3SYB3 417 aaPredicted RBP20.28■□□□□ 0.84
COMMD4-222ENST00000568034 UTP14CQ5TAP6 766 aaKnown RBP20.28■□□□□ 0.84
COMMD4-222ENST00000568034 FOXD4L3Q6VB84 417 aaPredicted RBP20.28■□□□□ 0.84
COMMD4-222ENST00000568034 RDM1Q8NG50 284 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 C11orf49Q9H6J7 331 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 DISC1Q9NRI5 854 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 PCDHA12Q9UN75 941 aa20.28■□□□□ 0.84
COMMD4-222ENST00000568034 MORC2Q9Y6X9 1032 aaPredicted RBP20.28■□□□□ 0.84
COMMD4-222ENST00000568034 IGSF9BQ9UPX0 1349 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 POTEMA6NI47 508 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 CABYRO75952 493 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 BMP15O95972 392 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 SFNP31947 248 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 FXR2P51116 673 aaKnown RBP eCLIP20.27■□□□□ 0.84
COMMD4-222ENST00000568034 PSMC6P62333 389 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 DNM1Q05193 864 aaKnown RBP20.27■□□□□ 0.84
COMMD4-222ENST00000568034 MIS18BP1Q6P0N0 1132 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 MIER3Q7Z3K6 550 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 AFAP1L1Q8TED9 768 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 TCEAL9Q9UHQ7 104 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 PCDHA10Q9Y5I2 948 aa20.27■□□□□ 0.84
COMMD4-222ENST00000568034 TECP42680 631 aa20.26■□□□□ 0.83
COMMD4-222ENST00000568034 PSEN2P49810 448 aa20.26■□□□□ 0.83
COMMD4-222ENST00000568034 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
COMMD4-222ENST00000568034 UGCGQ16739 394 aa20.26■□□□□ 0.83
COMMD4-222ENST00000568034 ARL6IP4Q66PJ3 421 aaKnown RBP20.26■□□□□ 0.83
COMMD4-222ENST00000568034 NCAPH2Q6IBW4 605 aa20.26■□□□□ 0.83
COMMD4-222ENST00000568034 NECAB2Q7Z6G3 386 aa20.26■□□□□ 0.83
COMMD4-222ENST00000568034 GLT1D1Q96MS3 346 aa20.26■□□□□ 0.83
COMMD4-222ENST00000568034 ZNF396Q96N95 335 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-222ENST00000568034 SENP6Q9GZR1 1112 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-222ENST00000568034 STARD7Q9NQZ5 370 aa20.26■□□□□ 0.83
COMMD4-222ENST00000568034 TFIP11Q9UBB9 837 aaKnown RBP20.26■□□□□ 0.83
COMMD4-222ENST00000568034 MKI67P46013 3256 aaKnown RBP20.26■□□□□ 0.83
COMMD4-222ENST00000568034 PSAPP07602 524 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 ATP4AP20648 1035 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 GRIN1Q05586 938 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 MFSD10Q14728 455 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 SNX17Q15036 470 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 SLC39A14Q15043 492 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 EPHA7Q15375 998 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 SWSAP1Q6NVH7 229 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 PLPPR4Q7Z2D5 763 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 IGSF22Q8N9C0 903 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 SLC43A3Q8NBI5 491 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 LINC00301Q8NCQ3 95 aa20.25■□□□□ 0.83
COMMD4-222ENST00000568034 PPP1R13LQ8WUF5 828 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms