RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 PRPF3O43395 683 aaKnown RBP8.61□□□□□ -1.03
GINS3-207ENST00000567400 EPB41L2O43491 1005 aaKnown RBP8.61□□□□□ -1.03
GINS3-207ENST00000567400 EDIL3O43854 480 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 NEFLP07196 543 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 FAM86B2P0C5J1 330 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 ARP10275 920 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 FOSL2P15408 326 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 TCF7P36402 384 aaPredicted RBP8.61□□□□□ -1.03
GINS3-207ENST00000567400 WDR5P61964 334 aaKnown RBP8.61□□□□□ -1.03
GINS3-207ENST00000567400 DEFB103AP81534 67 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 FGD1P98174 961 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 RAB30Q15771 203 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 RUFY3Q7L099 469 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 SPRED2Q7Z698 418 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 NLRX1Q86UT6 975 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 TEX2Q8IWB9 1127 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 CCDC155Q8N6L0 562 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 LMBR1Q8WVP7 490 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 ATP6V0A1Q93050 837 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 CDHR1Q96JP9 859 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 MXRA8Q9BRK3 442 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
GINS3-207ENST00000567400 FTOQ9C0B1 505 aaKnown RBP eCLIP8.61□□□□□ -1.03
GINS3-207ENST00000567400 ZMYND12Q9H0C1 365 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 PRDM12Q9H4Q4 367 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 SETD4Q9NVD3 440 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 NAP1L2Q9ULW6 460 aaPredicted RBP8.61□□□□□ -1.03
GINS3-207ENST00000567400 PCDHA11Q9Y5I1 949 aa8.61□□□□□ -1.03
GINS3-207ENST00000567400 EMSYQ7Z589 1322 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 MICAL3Q7RTP6 2002 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 IGLV3-22A0A075B6J6 115 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 CCDC196A0A1B0GTZ2 297 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 EPOPA6NHQ4 379 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 MEIS1O00470 390 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 BAIAP3O94812 1187 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 CCNE2O96020 404 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 CA3P07451 260 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 IFNAR1P17181 557 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 MARK3P27448 753 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 PSMA5P28066 241 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 THPOP40225 353 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
GINS3-207ENST00000567400 ARHGAP4P98171 946 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 AP3B2Q13367 1082 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 CEP55Q53EZ4 464 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 MARCH8Q5T0T0 291 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 UTP14CQ5TAP6 766 aaKnown RBP8.6□□□□□ -1.03
GINS3-207ENST00000567400 JAKMIP3Q5VZ66 844 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 RUFY4Q6ZNE9 571 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 HERC6Q8IVU3 1022 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 GIMAP8Q8ND71 665 aaPredicted RBP8.6□□□□□ -1.03
GINS3-207ENST00000567400 ZBTB10Q96DT7 871 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 SLC9A7Q96T83 725 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 TM6SF1Q9BZW5 370 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 AGO4Q9HCK5 861 aaKnown RBP8.6□□□□□ -1.03
GINS3-207ENST00000567400 JPH1Q9HDC5 661 aaPredicted RBP8.6□□□□□ -1.03
GINS3-207ENST00000567400 MSRAQ9UJ68 235 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 ZNF215Q9UL58 517 aaPredicted RBP8.6□□□□□ -1.03
GINS3-207ENST00000567400 MYO9BQ13459 2157 aa8.6□□□□□ -1.03
GINS3-207ENST00000567400 COL4A4P53420 1690 aaPredicted RBP8.59□□□□□ -1.03
GINS3-207ENST00000567400 NFASCO94856 1347 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 LCHNA4D1U4 455 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 MBLAC1A4D2B0 266 aaPredicted RBP8.59□□□□□ -1.03
GINS3-207ENST00000567400 RSPH10B2B2RC85 870 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 MAFGO15525 162 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 DHX15O43143 795 aaKnown RBP8.59□□□□□ -1.03
GINS3-207ENST00000567400 LGR5O75473 907 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
GINS3-207ENST00000567400 FOSP01100 380 aaPredicted RBP8.59□□□□□ -1.03
GINS3-207ENST00000567400 CTSHP09668 335 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 RSPH10BP0C881 870 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 ACTN1P12814 892 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 ACTR2P61160 394 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 NPY5RQ15761 445 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 PPP2R2DQ66LE6 453 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 CNKSR3Q6P9H4 555 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.59□□□□□ -1.03
GINS3-207ENST00000567400 PHOSPHO2Q8TCD6 241 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 RASGRP4Q8TDF6 673 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 SEPT1Q8WYJ6 367 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 LENG9Q96B70 501 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 RNF26Q9BY78 433 aaPredicted RBP8.59□□□□□ -1.03
GINS3-207ENST00000567400 EHMT1Q9H9B1 1298 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 SLC28A3Q9HAS3 691 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 VPS54Q9P1Q0 977 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 SLC9A2Q9UBY0 812 aa8.59□□□□□ -1.03
GINS3-207ENST00000567400 NRCAMQ92823 1304 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 IGKV6D-21A0A0A0MT36 114 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 DTNBO60941 627 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 CAND2O75155 1236 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 ATG7O95352 703 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 CHRNA1P02708 482 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 CYP3A4P08684 503 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 TAP1Q03518 808 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 MGAT3Q09327 533 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 GRIK4Q16099 956 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 PLEKHG4Q58EX7 1191 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 FAM26DQ5JW98 314 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 ERICH6BQ5W0A0 696 aa8.58□□□□□ -1.04
GINS3-207ENST00000567400 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms