RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, human

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-208	ENST00000567250	LGALS2	P05162	132 aa		13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	TCF7	P36402	384 aa	Predicted RBP	13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	JAK3	P52333	1124 aa		13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	IRX5	P78411	483 aa	Predicted RBP	13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	CALCRL	Q16602	461 aa		13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	TTC38	Q5R3I4	469 aa		13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	C1orf53	Q5VUE5	145 aa		13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	ETNPPL	Q8TBG4	499 aa		13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	AZI2	Q9H6S1	392 aa		13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	KCNMB3	Q9NPA1	279 aa		13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	DAXX	Q9UER7	740 aa	Predicted RBP	13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	SAMM50	Q9Y512	469 aa		13.75	□□□□□ -0.21
SF3B3-208	ENST00000567250	WDR64	B1ANS9	1081 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	DHX15	O43143	795 aa	Known RBP	13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	ZNF286B	P0CG31	522 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	ATP2B1	P20020	1258 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	MCM7	P33993	719 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	ACTR2	P61160	394 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	ITGA7	Q13683	1181 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	SNX17	Q15036	470 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	FAM160B1	Q5W0V3	765 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	MIS18BP1	Q6P0N0	1132 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	RDM1	Q8NG50	284 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	TNPO1	Q92973	898 aa	Known RBP	13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	KAT6A	Q92794	2004 aa		13.74	□□□□□ -0.21
SF3B3-208	ENST00000567250	TNRC18	O15417	2968 aa	Predicted RBP	13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	MKI67	P46013	3256 aa	Known RBP	13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	LOXHD1	Q8IVV2	1947 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250		H3BRB1	525 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	ARVCF	O00192	962 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	LAD1	O00515	517 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	TLR3	O15455	904 aa	Known RBP	13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	PSMD10	O75832	226 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	PSAP	P07602	524 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	OR52Z1	P0C646	297 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	SLC26A2	P50443	739 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	ATN1	P54259	1190 aa	Predicted RBP	13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	MLLT1	Q03111	559 aa	Predicted RBP	13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	PTPN11	Q06124	597 aa	Predicted RBP	13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	MFSD10	Q14728	455 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	TMEM266	Q2M3C6	531 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	UTP14C	Q5TAP6	766 aa	Known RBP	13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	NFRKB	Q6P4R8	1299 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	SLC39A5	Q6ZMH5	540 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	SPRYD3	Q8NCJ5	442 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	GLG1	Q92896	1179 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	SMARCAD1	Q9H4L7	1026 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	TUT1	Q9H6E5	874 aa	Known RBP	13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	ERAP1	Q9NZ08	941 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	CEP131	Q9UPN4	1083 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	PCDHA10	Q9Y5I2	948 aa		13.73	□□□□□ -0.21
SF3B3-208	ENST00000567250	GSTTP1	A0A1W2PQM5	241 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	BACH1	O14867	736 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	CHMP2A	O43633	222 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	LGR5	O75473	907 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	ATG7	O95352	703 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	BMP15	O95972	392 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	SUPT20HL2	P0C7V6	817 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	PSEN2	P49810	448 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	RTP1	P59025	263 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	PPP2R5C	Q13362	524 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	KIAA0753	Q2KHM9	967 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	FAM47C	Q5HY64	1035 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	MIER3	Q7Z3K6	550 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	FERMT3	Q86UX7	667 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	C7orf31	Q8N865	590 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	C16orf70	Q9BSU1	422 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	RAB34	Q9BZG1	259 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	BCAS3	Q9H6U6	928 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	DISC1	Q9NRI5	854 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	MTMR6	Q9Y217	621 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	ATP11B	Q9Y2G3	1177 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	TANC1	Q9C0D5	1861 aa		13.72	□□□□□ -0.21
SF3B3-208	ENST00000567250	ARID2	Q68CP9	1835 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	DCDC2C	A8MYV0	355 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	EVI5	O60447	810 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	DKC1	O60832	514 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	CCNE2	O96020	404 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	STAT5B	P51692	787 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	CHMP4BP1	P59074	171 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	PSMC6	P62333	389 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	REST	Q13127	1097 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	ZNF174	Q15697	407 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	LRRC26	Q2I0M4	334 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	TRIM60	Q495X7	471 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	PLPPR4	Q7Z2D5	763 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	SESTD1	Q86VW0	696 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	AFAP1L1	Q8TED9	768 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	ATP6V0A1	Q93050	837 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	TOX2	Q96NM4	488 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	UIMC1	Q96RL1	719 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	UNC45A	Q9H3U1	944 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	TTC12	Q9H892	705 aa	Predicted RBP	13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	ZNF302	Q9NR11	478 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	VAV3	Q9UKW4	847 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	PCDHA12	Q9UN75	941 aa		13.71	□□□□□ -0.21
SF3B3-208	ENST00000567250	IGSF9B	Q9UPX0	1349 aa		13.7	□□□□□ -0.22
SF3B3-208	ENST00000567250	LTBP2	Q14767	1821 aa		13.7	□□□□□ -0.22
SF3B3-208	ENST00000567250	IGKV6D-21	A0A0A0MT36	114 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms