RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 DGKIO75912 1065 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 SNAP25P60880 206 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 TDGQ13569 410 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 LY6KQ17RY6 165 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 SPOUT1Q5T280 376 aaKnown RBP11.43□□□□□ -0.58
CAPN3-216ENST00000567071 CCDC62Q6P9F0 684 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 SYCE2Q6PIF2 218 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 RNF207Q6ZRF8 634 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 ZNF444Q8N0Y2 327 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-216ENST00000567071 CASP10Q92851 521 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 ACSF2Q96CM8 615 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-216ENST00000567071 CEP95Q96GE4 821 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 GMCL1Q96IK5 515 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 MTMR4Q9NYA4 1195 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 ASPMQ8IZT6 3477 aa11.43□□□□□ -0.58
CAPN3-216ENST00000567071 NFIBO00712 420 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 SURF6O75683 361 aaKnown RBP11.42□□□□□ -0.58
CAPN3-216ENST00000567071 PROS1P07225 676 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 GNAT1P11488 350 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 LAMC2Q13753 1193 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 CTR9Q6PD62 1173 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 SLC30A10Q6XR72 485 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 SEPT14Q6ZU15 432 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 C1orf210Q8IVY1 113 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 STK11IPQ8N1F8 1099 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 TMEM57Q8N5G2 664 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 PPTC7Q8NI37 304 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 NETO1Q8TDF5 533 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 RASGRP4Q8TDF6 673 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 DDX1Q92499 740 aaKnown RBP11.42□□□□□ -0.58
CAPN3-216ENST00000567071 ARHGAP45Q92619 1136 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 ADAM7Q9H2U9 754 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 CYP26B1Q9NR63 512 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 DBR1Q9UK59 544 aaKnown RBP11.42□□□□□ -0.58
CAPN3-216ENST00000567071 PNMA2Q9UL42 364 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 PRR12Q9ULL5 1215 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 DUSP12Q9UNI6 340 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 USTQ9Y2C2 406 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 GTF3C3Q9Y5Q9 886 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 SLC4A4Q9Y6R1 1079 aa11.42□□□□□ -0.58
CAPN3-216ENST00000567071 TCRBV5S4A2TA0A5A2 114 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 RBAK-RBAKDNI3L0D1 243 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 STAG3L1P0CL83 205 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 MS4A1P11836 297 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 MCCP23508 829 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 PAN2Q504Q3 1202 aaKnown RBP11.41□□□□□ -0.58
CAPN3-216ENST00000567071 SPECC1Q5M775 1068 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 PPP4R3BQ5MIZ7 849 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 ITPRIPQ8IWB1 547 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 EXOC6Q8TAG9 804 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 ATRIPQ8WXE1 791 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 EMID1Q96A84 441 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-216ENST00000567071 GMEB2Q9UKD1 530 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 CACNA1IQ9P0X4 2223 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 KIAA1217Q5T5P2 1943 aa11.41□□□□□ -0.58
CAPN3-216ENST00000567071 ZZEF1O43149 2961 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 NAV2Q8IVL1 2488 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 IGKV6D-41A0A0C4DH26 115 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 ENPP3O14638 875 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 RPS6P62753 249 aaKnown RBP11.4□□□□□ -0.58
CAPN3-216ENST00000567071 PLPP4Q5VZY2 271 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 RCSD1Q6JBY9 416 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 XRRA1Q6P2D8 792 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 KCTD1Q719H9 257 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 NPAS4Q8IUM7 802 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 CRIPAKQ8N1N5 446 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 CHMP4CQ96CF2 233 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.4□□□□□ -0.58
CAPN3-216ENST00000567071 ENTPD7Q9NQZ7 604 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 PUF60Q9UHX1 559 aaKnown RBP11.4□□□□□ -0.58
CAPN3-216ENST00000567071 SMG5Q9UPR3 1016 aaKnown RBP11.4□□□□□ -0.58
CAPN3-216ENST00000567071 FRYQ5TBA9 3013 aa11.4□□□□□ -0.58
CAPN3-216ENST00000567071 MINDY4BA8MYZ0 360 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 GOLIM4O00461 696 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 SLC30A4O14863 429 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 TREHO43280 583 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 TSPY3P0CV98 308 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 TSPY8P0CW00 308 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 GHRP10912 638 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 SHC2P98077 582 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 KCNC3Q14003 757 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 NONOQ15233 471 aaKnown RBP eCLIP11.39□□□□□ -0.59
CAPN3-216ENST00000567071 STXBP2Q15833 593 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 ATAT1Q5SQI0 421 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 THNSL1Q8IYQ7 743 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 EAF2Q96CJ1 260 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-216ENST00000567071 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
CAPN3-216ENST00000567071 TBC1D17Q9HA65 648 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 TMEM260Q9NX78 707 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 WNT16Q9UBV4 365 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 MRVI1Q9Y6F6 885 aa11.39□□□□□ -0.59
CAPN3-216ENST00000567071 FGF18O76093 207 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 EOMESO95936 686 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 DCNP07585 359 aaKnown RBP11.38□□□□□ -0.59
CAPN3-216ENST00000567071 ERVFC1P60507 584 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 HIC1Q14526 733 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 CCDC96Q2M329 555 aa11.38□□□□□ -0.59
CAPN3-216ENST00000567071 ZNF528Q3MIS6 628 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms