RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 PCDHA6Q9UN73 950 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 PCDHA8Q9Y5H6 950 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 UBIAD1Q9Y5Z9 338 aa17.43■□□□□ 0.38
SMPD3-208ENST00000566723 ZBTB43O43298 467 aa17.42■□□□□ 0.38
SMPD3-208ENST00000566723 ATP9AO75110 1047 aa17.42■□□□□ 0.38
SMPD3-208ENST00000566723 TCF7P36402 384 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-208ENST00000566723 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-208ENST00000566723 TEX2Q8IWB9 1127 aa17.42■□□□□ 0.38
SMPD3-208ENST00000566723 DBF4BQ8NFT6 615 aa17.42■□□□□ 0.38
SMPD3-208ENST00000566723 TSPYL2Q9H2G4 693 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-208ENST00000566723 BRPF3Q9ULD4 1205 aa17.42■□□□□ 0.38
SMPD3-208ENST00000566723 MTCH2Q9Y6C9 303 aa17.42■□□□□ 0.38
SMPD3-208ENST00000566723 LOXHD1Q8IVV2 1947 aa17.42■□□□□ 0.38
SMPD3-208ENST00000566723 RBAK-RBAKDNI3L0D1 243 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 CTSHP09668 335 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 RCAN1P53805 252 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 NAPAP54920 295 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 ADAM17P78536 824 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 MRPS5P82675 430 aaKnown RBP17.41■□□□□ 0.38
SMPD3-208ENST00000566723 ARHGAP4P98171 946 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 FUT2Q10981 343 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 PLEKHG4Q58EX7 1191 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 TYW1BQ6NUM6 668 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 SPRED2Q7Z698 418 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 ASB2Q96Q27 587 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 RAD9AQ99638 391 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 JADE2Q9NQC1 790 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 NRCAMQ92823 1304 aa17.41■□□□□ 0.38
SMPD3-208ENST00000566723 RALGAPA2Q2PPJ7 1873 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 KLF18A0A0U1RQI7 1052 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 GOLGA8AA7E2F4 631 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 GOLGA8BA8MQT2 603 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 hCG_1984214I3L0E3 225 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 MAFGO15525 162 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 HMGB1P09429 215 aaKnown RBP17.4■□□□□ 0.38
SMPD3-208ENST00000566723 ZNF713Q8N859 430 aaPredicted RBP17.4■□□□□ 0.38
SMPD3-208ENST00000566723 SEPT1Q8WYJ6 367 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 SEPT8Q92599 483 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 RIC8AQ9NPQ8 531 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 PKD2L1Q9P0L9 805 aa17.4■□□□□ 0.38
SMPD3-208ENST00000566723 COL4A6Q14031 1691 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 GSTTP1A0A1W2PQM5 241 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 LINC01553A4QN01 128 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 AMHP03971 560 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 ADCY7P51828 1080 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 GRB10Q13322 594 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 KRT40Q6A162 431 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 FAM117BQ6P1L5 589 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMPD3-208ENST00000566723 MYOCDQ8IZQ8 938 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 ERAP1Q9NZ08 941 aa17.39■□□□□ 0.37
SMPD3-208ENST00000566723 MYH9P35579 1960 aaKnown RBP17.39■□□□□ 0.37
SMPD3-208ENST00000566723 STXBP3O00186 592 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 LPXNO60711 386 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 MARK3P27448 753 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 PPFIA1Q13136 1202 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 SKIV2LQ15477 1246 aaKnown RBP17.38■□□□□ 0.37
SMPD3-208ENST00000566723 FAM26DQ5JW98 314 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 GDPD5Q8WTR4 605 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 GLG1Q92896 1179 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
SMPD3-208ENST00000566723 MXRA8Q9BRK3 442 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 ANO3Q9BYT9 981 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 JPH1Q9HDC5 661 aaPredicted RBP17.38■□□□□ 0.37
SMPD3-208ENST00000566723 FAM217BQ9NTX9 383 aaPredicted RBP17.38■□□□□ 0.37
SMPD3-208ENST00000566723 BARHL2Q9NY43 387 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 V9GY48 417 aaPredicted RBP17.38■□□□□ 0.37
SMPD3-208ENST00000566723 WDR81Q562E7 1941 aa17.38■□□□□ 0.37
SMPD3-208ENST00000566723 FOSP01100 380 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-208ENST00000566723 CDC27P30260 824 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 ERVK-21P61565 698 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 AP3B2Q13367 1082 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 GRIK4Q16099 956 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 TAF2Q6P1X5 1199 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 RPAINQ86UA6 219 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 IL27Q8NEV9 243 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 ADAMTS19Q8TE59 1207 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 APBB2Q92870 758 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 KCNB2Q92953 911 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 PGBD1Q96JS3 809 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 OSBPL7Q9BZF2 842 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 GLT8D2Q9H1C3 349 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 SMARCAD1Q9H4L7 1026 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 KCNH7Q9NS40 1196 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 SLC9A2Q9UBY0 812 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 TUBE1Q9UJT0 475 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 INSL6Q9Y581 213 aa17.37■□□□□ 0.37
SMPD3-208ENST00000566723 TNFRSF10AO00220 468 aa17.36■□□□□ 0.37
SMPD3-208ENST00000566723 SREBF1P36956 1147 aa17.36■□□□□ 0.37
SMPD3-208ENST00000566723 METAP2P50579 478 aaKnown RBP eCLIP17.36■□□□□ 0.37
SMPD3-208ENST00000566723 HTRA4P83105 476 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-208ENST00000566723 FGD1P98174 961 aa17.36■□□□□ 0.37
SMPD3-208ENST00000566723 CEP55Q53EZ4 464 aa17.36■□□□□ 0.37
SMPD3-208ENST00000566723 RUFY4Q6ZNE9 571 aa17.36■□□□□ 0.37
SMPD3-208ENST00000566723 SP7Q8TDD2 431 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-208ENST00000566723 SDF4Q9BRK5 362 aa17.36■□□□□ 0.37
SMPD3-208ENST00000566723 IFIH1Q9BYX4 1025 aaKnown RBP17.36■□□□□ 0.37
SMPD3-208ENST00000566723 MTUS1Q9ULD2 1270 aa17.36■□□□□ 0.37
SMPD3-208ENST00000566723 NAP1L2Q9ULW6 460 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-208ENST00000566723 NFASCO94856 1347 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms