RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 PARVGQ9HBI0 331 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 PDS5AQ29RF7 1337 aaKnown RBP12.68□□□□□ -0.38
CDH1-210ENST00000566612 ITIH6Q6UXX5 1313 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 PALMO75781 387 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 MYZAPP0CAP1 466 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 MAP2K1Q02750 393 aaPredicted RBP12.68□□□□□ -0.38
CDH1-210ENST00000566612 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 IMPG2Q9BZV3 1241 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 KBTBD4Q9NVX7 518 aa12.68□□□□□ -0.38
CDH1-210ENST00000566612 EIF3CLB5ME19 914 aaKnown RBP12.67□□□□□ -0.38
CDH1-210ENST00000566612 NDUFB10O96000 172 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 FUT2Q10981 343 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 PPFIA1Q13136 1202 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 SLC27A3Q5K4L6 730 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 GSTA5Q7RTV2 222 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 FAM71BQ8TC56 605 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 EIF3CQ99613 913 aaKnown RBP12.67□□□□□ -0.38
CDH1-210ENST00000566612 BCS1LQ9Y276 419 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 AFDNP55196 1824 aaKnown RBP12.67□□□□□ -0.38
CDH1-210ENST00000566612 CEP85LQ5SZL2 805 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 UHMK1Q8TAS1 419 aaKnown RBP12.67□□□□□ -0.38
CDH1-210ENST00000566612 DYDC2Q96IM9 177 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 IFT74Q96LB3 600 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 NACC1Q96RE7 527 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 SMARCAL1Q9NZC9 954 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 AP3B2Q13367 1082 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 MICALCLQ6ZW33 695 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 SYCE1Q8N0S2 351 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 CCDC114Q96M63 670 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 AP1M1Q9BXS5 423 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 MTUS1Q9ULD2 1270 aa12.67□□□□□ -0.38
CDH1-210ENST00000566612 ESYT3A0FGR9 886 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 TNNI1P19237 187 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 GRB10Q13322 594 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 IL17AQ16552 155 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 WDR44Q5JSH3 913 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 TTI2Q6NXR4 508 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 BANK1Q8NDB2 785 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 SYNCQ9H7C4 482 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 MED4Q9NPJ6 270 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 ANKRD62A6NC57 917 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 NR3C1P04150 777 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 ZSCAN20P17040 1043 aaPredicted RBP12.66□□□□□ -0.38
CDH1-210ENST00000566612 ZNF341Q9BYN7 854 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 USTQ9Y2C2 406 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
CDH1-210ENST00000566612 LMO7Q8WWI1 1683 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 GOLGA8IPA6NC78 632 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 GOLGA8JA6NMD2 632 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 ACTN1P12814 892 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 TAL1P17542 331 aaPredicted RBP12.66□□□□□ -0.38
CDH1-210ENST00000566612 CALCOCO2Q13137 446 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 TBX2Q13207 712 aaPredicted RBP12.66□□□□□ -0.38
CDH1-210ENST00000566612 CPLX4Q7Z7G2 160 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 PROM2Q8N271 834 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 UBL4BQ8N7F7 174 aa12.66□□□□□ -0.38
CDH1-210ENST00000566612 PAIP2Q9BPZ3 127 aaKnown RBP12.66□□□□□ -0.38
CDH1-210ENST00000566612 ZNF277Q9NRM2 450 aaPredicted RBP12.66□□□□□ -0.38
CDH1-210ENST00000566612 GNGT1P63211 74 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 E2F4Q16254 413 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 KNOP1Q1ED39 458 aaKnown RBP12.65□□□□□ -0.38
CDH1-210ENST00000566612 KRT71Q3SY84 523 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 CCDC105Q8IYK2 499 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 ARFGAP2Q8N6H7 521 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 HOOK2Q96ED9 719 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 LACRTQ9GZZ8 138 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 EXOC7Q9UPT5 735 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 POLD1P28340 1107 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 HSPA1LP34931 641 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 MYL7Q01449 175 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 MESDQ14696 234 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 SH3RF1Q7Z6J0 888 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 OTUD6BQ8N6M0 293 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 DAGLBQ8NCG7 672 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 ZNF384Q8TF68 577 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 KIFAP3Q92845 792 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 LRRC45Q96CN5 670 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 NAP1L3Q99457 506 aaPredicted RBP12.65□□□□□ -0.38
CDH1-210ENST00000566612 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 CEP72Q9P209 647 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 MTRF1LQ9UGC7 380 aaKnown RBP12.65□□□□□ -0.38
CDH1-210ENST00000566612 GAP43P17677 238 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 CTNNA1P35221 906 aaKnown RBP12.65□□□□□ -0.38
CDH1-210ENST00000566612 USP11P51784 963 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 FMNL3Q8IVF7 1028 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 OSBPL9Q96SU4 736 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
CDH1-210ENST00000566612 NFU1Q9UMS0 254 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 BZW2Q9Y6E2 419 aaKnown RBP12.65□□□□□ -0.38
CDH1-210ENST00000566612 ATRNO75882 1429 aa12.65□□□□□ -0.38
CDH1-210ENST00000566612 ANKRD65E5RJM6 399 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 NMT1P30419 496 aaKnown RBP12.64□□□□□ -0.39
CDH1-210ENST00000566612 SLC30A10Q6XR72 485 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 EIF2AK1Q9BQI3 630 aaKnown RBP12.64□□□□□ -0.39
CDH1-210ENST00000566612 UBE2TQ9NPD8 197 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms