RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 DTNBO60941 627 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 FAM86B2P0C5J1 330 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 RFC2P35250 354 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 HIC1Q14526 733 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 C8orf34Q49A92 452 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 AFAP1L1Q8TED9 768 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 HERVK_113Q902F9 699 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 SMARCAD1Q9H4L7 1026 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 SETD4Q9NVD3 440 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 PCDHA4Q9UN74 947 aa21.98■■□□□ 1.11
CCDC113-204ENST00000566498 LAMA2P24043 3122 aaKnown RBP21.98■■□□□ 1.11
CCDC113-204ENST00000566498 DDX39AO00148 427 aaKnown RBP21.97■■□□□ 1.11
CCDC113-204ENST00000566498 PFKMP08237 780 aa21.97■■□□□ 1.11
CCDC113-204ENST00000566498 CKBP12277 381 aa21.97■■□□□ 1.11
CCDC113-204ENST00000566498 SELPP16109 830 aa21.97■■□□□ 1.11
CCDC113-204ENST00000566498 XBP1P17861 261 aa21.97■■□□□ 1.11
CCDC113-204ENST00000566498 MARK3P27448 753 aa21.97■■□□□ 1.11
CCDC113-204ENST00000566498 ME3Q16798 604 aa21.97■■□□□ 1.11
CCDC113-204ENST00000566498 DHX38Q92620 1227 aaKnown RBP21.97■■□□□ 1.11
CCDC113-204ENST00000566498 AZI2Q9H6S1 392 aa21.97■■□□□ 1.11
CCDC113-204ENST00000566498 ERAP1Q9NZ08 941 aa21.97■■□□□ 1.11
CCDC113-204ENST00000566498 NFASCO94856 1347 aa21.97■■□□□ 1.11
CCDC113-204ENST00000566498 ZBBXA8MT70 800 aa21.96■■□□□ 1.11
CCDC113-204ENST00000566498 IPO5O00410 1097 aaKnown RBP21.96■■□□□ 1.11
CCDC113-204ENST00000566498 ACTN1P12814 892 aa21.96■■□□□ 1.11
CCDC113-204ENST00000566498 ACTR2P61160 394 aa21.96■■□□□ 1.11
CCDC113-204ENST00000566498 ITGB3BPQ13352 177 aaPredicted RBP21.96■■□□□ 1.11
CCDC113-204ENST00000566498 PRR16Q569H4 304 aa21.96■■□□□ 1.11
CCDC113-204ENST00000566498 GALNT17Q6IS24 598 aa21.96■■□□□ 1.11
CCDC113-204ENST00000566498 LRRC8DQ7L1W4 858 aa21.96■■□□□ 1.11
CCDC113-204ENST00000566498 BLIDQ8IZY5 108 aa21.96■■□□□ 1.11
CCDC113-204ENST00000566498 CRYGNQ8WXF5 182 aa21.96■■□□□ 1.11
CCDC113-204ENST00000566498 ZNF577Q9BSK1 485 aa21.96■■□□□ 1.11
CCDC113-204ENST00000566498 ORC3Q9UBD5 711 aaPredicted RBP21.96■■□□□ 1.11
CCDC113-204ENST00000566498 TREHO43280 583 aa21.95■■□□□ 1.1
CCDC113-204ENST00000566498 THPOP40225 353 aa21.95■■□□□ 1.1
CCDC113-204ENST00000566498 USP11P51784 963 aa21.95■■□□□ 1.1
CCDC113-204ENST00000566498 ZNF697Q5TEC3 545 aa21.95■■□□□ 1.1
CCDC113-204ENST00000566498 SERINC5Q86VE9 423 aa21.95■■□□□ 1.1
CCDC113-204ENST00000566498 FAM161BQ96MY7 647 aa21.95■■□□□ 1.1
CCDC113-204ENST00000566498 C22orf23Q9BZE7 217 aa21.95■■□□□ 1.1
CCDC113-204ENST00000566498 CXXC1Q9P0U4 656 aaPredicted RBP21.95■■□□□ 1.1
CCDC113-204ENST00000566498 KCNJ14Q9UNX9 436 aa21.95■■□□□ 1.1
CCDC113-204ENST00000566498 SLC4A7Q9Y6M7 1214 aa21.95■■□□□ 1.1
CCDC113-204ENST00000566498 SCN5AQ14524 2016 aa21.94■■□□□ 1.1
CCDC113-204ENST00000566498 KAT6AQ92794 2004 aa21.94■■□□□ 1.1
CCDC113-204ENST00000566498 IGLV3-22A0A075B6J6 115 aa21.94■■□□□ 1.1
CCDC113-204ENST00000566498 GRXCR1A8MXD5 290 aa21.94■■□□□ 1.1
CCDC113-204ENST00000566498 ZNF618Q5T7W0 954 aa21.94■■□□□ 1.1
CCDC113-204ENST00000566498 RASIP1Q5U651 963 aa21.94■■□□□ 1.1
CCDC113-204ENST00000566498 FAM109BQ6ICB4 259 aaPredicted RBP21.94■■□□□ 1.1
CCDC113-204ENST00000566498 FAM177A1Q8N128 213 aaPredicted RBP21.94■■□□□ 1.1
CCDC113-204ENST00000566498 TBCKQ8TEA7 893 aa21.94■■□□□ 1.1
CCDC113-204ENST00000566498 WASF1Q92558 559 aa21.94■■□□□ 1.1
CCDC113-204ENST00000566498 VWCEQ96DN2 955 aa21.94■■□□□ 1.1
CCDC113-204ENST00000566498 PARNO95453 639 aaKnown RBP21.93■■□□□ 1.1
CCDC113-204ENST00000566498 LARGE1O95461 756 aa21.93■■□□□ 1.1
CCDC113-204ENST00000566498 CTDNEP1O95476 244 aa21.93■■□□□ 1.1
CCDC113-204ENST00000566498 CIITAP33076 1130 aa21.93■■□□□ 1.1
CCDC113-204ENST00000566498 STAT5BP51692 787 aa21.93■■□□□ 1.1
CCDC113-204ENST00000566498 SETQ01105 290 aaPredicted RBP21.93■■□□□ 1.1
CCDC113-204ENST00000566498 NRCAMQ92823 1304 aa21.93■■□□□ 1.1
CCDC113-204ENST00000566498 WNT8BQ93098 351 aa21.93■■□□□ 1.1
CCDC113-204ENST00000566498 STK36Q9NRP7 1315 aa21.93■■□□□ 1.1
CCDC113-204ENST00000566498 TBC1D22BQ9NU19 505 aa21.93■■□□□ 1.1
CCDC113-204ENST00000566498 MTMR10Q9NXD2 777 aa21.93■■□□□ 1.1
CCDC113-204ENST00000566498 BACH1O14867 736 aa21.92■■□□□ 1.1
CCDC113-204ENST00000566498 RBL2Q08999 1139 aa21.92■■□□□ 1.1
CCDC113-204ENST00000566498 PPFIA1Q13136 1202 aa21.92■■□□□ 1.1
CCDC113-204ENST00000566498 TRIM71Q2Q1W2 868 aaKnown RBP21.92■■□□□ 1.1
CCDC113-204ENST00000566498 LMBR1Q8WVP7 490 aa21.92■■□□□ 1.1
CCDC113-204ENST00000566498 TNPO1Q92973 898 aaKnown RBP21.92■■□□□ 1.1
CCDC113-204ENST00000566498 GTF3C6Q969F1 213 aa21.92■■□□□ 1.1
CCDC113-204ENST00000566498 TCEAL9Q9UHQ7 104 aa21.92■■□□□ 1.1
CCDC113-204ENST00000566498 LIMCH1Q9UPQ0 1083 aa21.92■■□□□ 1.1
CCDC113-204ENST00000566498 EMSYQ7Z589 1322 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 RSPH10B2B2RC85 870 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 DHX15O43143 795 aaKnown RBP21.91■■□□□ 1.1
CCDC113-204ENST00000566498 LGR5O75473 907 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 CCNE2O96020 404 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 RSPH10BP0C881 870 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 HOXC8P31273 242 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 IGBP1P78318 339 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 PLPPR4Q7Z2D5 763 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 DAGLBQ8NCG7 672 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 PCYT2Q99447 389 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 PHF20Q9BVI0 1012 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 SEMA6BQ9H3T3 888 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 GJB4Q9NTQ9 266 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 TRPC6Q9Y210 931 aa21.91■■□□□ 1.1
CCDC113-204ENST00000566498 ATG7O95352 703 aa21.9■■□□□ 1.1
CCDC113-204ENST00000566498 DNAJB2P25686 324 aa21.9■■□□□ 1.1
CCDC113-204ENST00000566498 NONOQ15233 471 aaKnown RBP eCLIP21.9■■□□□ 1.1
CCDC113-204ENST00000566498 GRIK4Q16099 956 aa21.9■■□□□ 1.1
CCDC113-204ENST00000566498 FAM160B1Q5W0V3 765 aa21.9■■□□□ 1.1
CCDC113-204ENST00000566498 MIS18BP1Q6P0N0 1132 aa21.9■■□□□ 1.1
CCDC113-204ENST00000566498 KRT25Q7Z3Z0 450 aa21.9■■□□□ 1.1
CCDC113-204ENST00000566498 MSRAQ9UJ68 235 aa21.9■■□□□ 1.1
CCDC113-204ENST00000566498 CCDC194A0A1B0GVG4 234 aa21.89■■□□□ 1.09
CCDC113-204ENST00000566498 M0R2N6 131 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms