RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 ANO9A1A5B4 782 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 CTAGE15A4D2H0 777 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 PDXKO00764 312 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 ERLIN1O75477 346 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 FAM13AO94988 1023 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 CTAGE8P0CG41 777 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 MAP3K10Q02779 954 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 PABPC4Q13310 644 aaKnown RBP eCLIP14.76□□□□□ -0.05
LINC00563-201ENST00000566370 PPP2R5CQ13362 524 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 ADAM9Q13443 819 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 RRP1BQ14684 758 aaKnown RBP14.76□□□□□ -0.05
LINC00563-201ENST00000566370 CTAGE6Q86UF2 777 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 CTAGE4Q8IX94 777 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 SYN2Q92777 582 aaPredicted RBP14.76□□□□□ -0.05
LINC00563-201ENST00000566370 SLC5A5Q92911 643 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 LENG9Q96B70 501 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 RPGRIP1Q96KN7 1286 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 ALS2CR12Q96Q35 445 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 NACC1Q96RE7 527 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 CHP1Q99653 195 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 GBP3Q9H0R5 595 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 VAV3Q9UKW4 847 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 SIK3Q9Y2K2 1263 aa14.76□□□□□ -0.05
LINC00563-201ENST00000566370 ZBTB12Q9Y330 459 aaPredicted RBP14.76□□□□□ -0.05
LINC00563-201ENST00000566370 SLC16A3O15427 465 aaKnown RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 AKR1B10O60218 316 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 TACC1O75410 805 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 ICAM1P05362 532 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 H2AFXP16104 143 aaPredicted RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 MCM3P25205 808 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 VAV2P52735 878 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 USP14P54578 494 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 JAG1P78504 1218 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 GIT2Q14161 759 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 NAA30Q147X3 362 aaPredicted RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 KNOP1Q1ED39 458 aaKnown RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 SLC9C1Q4G0N8 1177 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 CEP55Q53EZ4 464 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 FBXO38Q6PIJ6 1188 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 NIPA1Q7RTP0 329 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 FRMD5Q7Z6J6 570 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 NELFCDQ8IXH7 590 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 PRPF38AQ8NAV1 312 aaKnown RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 GJA10Q969M2 543 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 ZBED3Q96IU2 234 aaPredicted RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 RIT2Q99578 217 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 ARID3AQ99856 593 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 ZNF577Q9BSK1 485 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 TMEM39BQ9GZU3 492 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 DEFB129Q9H1M3 183 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 FAM207AQ9NSI2 230 aaPredicted RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 TYW1Q9NV66 732 aaKnown RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 CCPG1Q9ULG6 757 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 TRAF3IP3Q9Y228 551 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 ATAD5Q96QE3 1844 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 SSU72P8A0A1W2PR75 194 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 DCAF8L1A6NGE4 600 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 RNF225M0QZC1 329 aaPredicted RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 EIF3DO15371 548 aaKnown RBP eCLIP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 EPB41P11171 864 aaKnown RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 ARHGAP25P42331 645 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 CXCL9Q07325 125 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 EPHA7Q15375 998 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 ZYXQ15942 572 aaKnown RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 DCAF15Q66K64 600 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 CCDC70Q6NSX1 233 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 WDR59Q6PJI9 974 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 POTEAQ6S8J7 498 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 FMNL3Q8IVF7 1028 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 ZC3H3Q8IXZ2 948 aaKnown RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 KRT222Q8N1A0 295 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 TRIM58Q8NG06 486 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 GOLGA5Q8TBA6 731 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 SECISBP2LQ93073 1101 aaKnown RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 REEP2Q9BRK0 252 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 BHMT2Q9H2M3 363 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 OLFML3Q9NRN5 406 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 AGPAT5Q9NUQ2 364 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 TBC1D7Q9P0N9 293 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 ARMCX3Q9UH62 379 aaPredicted RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 DDX41Q9UJV9 622 aaKnown RBP14.75□□□□□ -0.05
LINC00563-201ENST00000566370 MYO6Q9UM54 1294 aa14.75□□□□□ -0.05
LINC00563-201ENST00000566370 IGLV3-22A0A075B6J6 115 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 WNT10BO00744 389 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 OPLAHO14841 1288 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 CTNND1O60716 968 aaKnown RBP14.74□□□□□ -0.05
LINC00563-201ENST00000566370 ZBED4O75132 1171 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 PSMD10O75832 226 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 SPATA31C1P0DKV0 1188 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 KCNA3P22001 575 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 NR2F2P24468 414 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 BRD3Q15059 726 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 BMT2Q1RMZ1 405 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 SFMBT2Q5VUG0 894 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 PDXDC1Q6P996 788 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 MIGA2Q7L4E1 593 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 RRAGAQ7L523 313 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 SFR1Q86XK3 245 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 TRIM59Q8IWR1 403 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms