RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 CLDND1Q9NY35 253 aa15.49■□□□□ 0.07
COMMD4-214ENST00000566230 PRKAG3Q9UGI9 489 aa15.49■□□□□ 0.07
COMMD4-214ENST00000566230 FRMPD4Q14CM0 1322 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 C5orf67F2Z3F1 127 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 NOP56O00567 594 aaKnown RBP15.48■□□□□ 0.07
COMMD4-214ENST00000566230 GRM6O15303 877 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 CYTH3O43739 400 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 CHRNA1P02708 482 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 GSPT1P15170 499 aaKnown RBP15.48■□□□□ 0.07
COMMD4-214ENST00000566230 IRS1P35568 1242 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 MRE11P49959 708 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 NHLH1Q02575 133 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 DLX2Q07687 328 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-214ENST00000566230 GRM4Q14833 912 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 METTL7BQ6UX53 244 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 CYFIP1Q7L576 1253 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 RPAINQ86UA6 219 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 FIBCD1Q8N539 461 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 LMBR1Q8WVP7 490 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 APBB2Q92870 758 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 FBXL18Q96ME1 805 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 IL25Q9H293 177 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 FAM50BQ9Y247 325 aa15.48■□□□□ 0.07
COMMD4-214ENST00000566230 GNAT1P11488 350 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 CTNNB1P35222 781 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 BMPR1AP36894 532 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 HYAL1Q12794 435 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 NEDD9Q14511 834 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 UTP14CQ5TAP6 766 aaKnown RBP15.47■□□□□ 0.07
COMMD4-214ENST00000566230 RUFY2Q8WXA3 655 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 EHMT1Q9H9B1 1298 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 RC3H2Q9HBD1 1191 aaKnown RBP15.47■□□□□ 0.07
COMMD4-214ENST00000566230 SENP2Q9HC62 589 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 RTEL1Q9NZ71 1219 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 LOXHD1Q8IVV2 1947 aa15.47■□□□□ 0.07
COMMD4-214ENST00000566230 KIAA1671Q9BY89 1806 aa15.46■□□□□ 0.07
COMMD4-214ENST00000566230 PNMA6FA0A0J9YX94 578 aa15.46■□□□□ 0.07
COMMD4-214ENST00000566230 RB1P06400 928 aa15.46■□□□□ 0.07
COMMD4-214ENST00000566230 GTF2F1P35269 517 aaKnown RBP eCLIP15.46■□□□□ 0.074e-9■■■■■ 28.7
COMMD4-214ENST00000566230 ARHGAP4P98171 946 aa15.46■□□□□ 0.07
COMMD4-214ENST00000566230 SMAD2Q15796 467 aaKnown RBP15.46■□□□□ 0.07
COMMD4-214ENST00000566230 CLUL1Q15846 466 aa15.46■□□□□ 0.07
COMMD4-214ENST00000566230 GNPTABQ3T906 1256 aa15.46■□□□□ 0.07
COMMD4-214ENST00000566230 RUFY4Q6ZNE9 571 aa15.46■□□□□ 0.07
COMMD4-214ENST00000566230 HFE2Q6ZVN8 426 aa15.46■□□□□ 0.07
COMMD4-214ENST00000566230 LMAN2LQ9H0V9 348 aa15.46■□□□□ 0.07
COMMD4-214ENST00000566230 ENPP3O14638 875 aa15.45■□□□□ 0.06
COMMD4-214ENST00000566230 FIBPO43427 364 aa15.45■□□□□ 0.06
COMMD4-214ENST00000566230 MBTPS2O43462 519 aa15.45■□□□□ 0.06
COMMD4-214ENST00000566230 NCK2O43639 380 aa15.45■□□□□ 0.06
COMMD4-214ENST00000566230 STAM2O75886 525 aa15.45■□□□□ 0.06
COMMD4-214ENST00000566230 TRAF1Q13077 416 aa15.45■□□□□ 0.06
COMMD4-214ENST00000566230 LPIN1Q14693 890 aa15.45■□□□□ 0.06
COMMD4-214ENST00000566230 CLP1Q92989 425 aaKnown RBP15.45■□□□□ 0.06
COMMD4-214ENST00000566230 ZNF689Q96CS4 500 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-214ENST00000566230 C11orf84Q9BUA3 381 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-214ENST00000566230 LINC01565O15544 149 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 TBX10O75333 385 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 GHRP10912 638 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 CHMLP26374 656 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 SP4Q02446 784 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 MGAT3Q09327 533 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 TROAPQ12815 778 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 CAMK1Q14012 370 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 SENP7Q9BQF6 1050 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 UPF3BQ9BZI7 483 aaKnown RBP15.44■□□□□ 0.06
COMMD4-214ENST00000566230 KCNH6Q9H252 994 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 ZNF215Q9UL58 517 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-214ENST00000566230 ZDBF2Q9HCK1 2354 aa15.44■□□□□ 0.06
COMMD4-214ENST00000566230 ADGRA3Q8IWK6 1321 aa15.43■□□□□ 0.06
COMMD4-214ENST00000566230 NRCAMQ92823 1304 aa15.43■□□□□ 0.06
COMMD4-214ENST00000566230 ADAM15Q13444 863 aa15.43■□□□□ 0.06
COMMD4-214ENST00000566230 HERC4Q5GLZ8 1057 aaPredicted RBP15.43■□□□□ 0.06
COMMD4-214ENST00000566230 RNF135Q8IUD6 432 aa15.43■□□□□ 0.06
COMMD4-214ENST00000566230 PIBF1Q8WXW3 757 aa15.43■□□□□ 0.06
COMMD4-214ENST00000566230 IGFLR1Q9H665 355 aa15.43■□□□□ 0.06
COMMD4-214ENST00000566230 ALG13Q9NP73 1137 aaKnown RBP15.43■□□□□ 0.06
COMMD4-214ENST00000566230 MUTYHQ9UIF7 546 aa15.43■□□□□ 0.06
COMMD4-214ENST00000566230 RWDD3Q9Y3V2 267 aa15.43■□□□□ 0.06
COMMD4-214ENST00000566230 IFIT3O14879 490 aaKnown RBP15.42■□□□□ 0.06
COMMD4-214ENST00000566230 ATP9AO75110 1047 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 DGKIO75912 1065 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 DNAJB1P25685 340 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 TCF7P36402 384 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-214ENST00000566230 BMP2KLQ5H9B9 411 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 FBXO47Q5MNV8 452 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 PCNX4Q63HM2 1172 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 USP17L6PQ6QN14 398 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 RTN4RL1Q86UN2 441 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-214ENST00000566230 LINC01599Q8WXQ3 324 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 PLAGL2Q9UPG8 496 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 TAF6LQ9Y6J9 622 aa15.42■□□□□ 0.06
COMMD4-214ENST00000566230 GSTTP1A0A1W2PQM5 241 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 MEIS2O14770 477 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 CSPG5O95196 566 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 MMP1P03956 469 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 CYP21A2P08686 494 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 SMAD4Q13485 552 aaKnown RBP15.41■□□□□ 0.06
COMMD4-214ENST00000566230 BTG3Q14201 252 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-214ENST00000566230 MARCH8Q5T0T0 291 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms