RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 HNRNPH3P31942 346 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 ITGB3BPQ13352 177 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 MB21D1Q8N884 522 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CAPZA3Q96KX2 299 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CTAGE1Q96RT6 745 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 EPB41L1Q9H4G0 881 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 VPS37BQ9H9H4 285 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 TLR7Q9NYK1 1049 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 PA2G4Q9UQ80 394 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 AK9Q5TCS8 1911 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ASAP2O43150 1006 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PJA2O43164 708 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PCK1P35558 622 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 RFX5P48382 616 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZNF131P52739 623 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZC3H6P61129 1189 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 CYP27A1Q02318 531 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 TSHZ1Q6ZSZ6 1077 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 LMNTD2Q8IXW0 634 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 RELTQ969Z4 430 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PAGE5Q96GU1 130 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 MTA3Q9BTC8 594 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 NUP85Q9BW27 656 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PPP1R12CQ9BZL4 782 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 TRAF3IP3Q9Y228 551 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 TSC22D4Q9Y3Q8 395 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 A2ML1A8K2U0 1454 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ABCA9Q8IUA7 1624 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 UTYO14607 1347 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 A0A0G2JLW4 131 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 BTBD19C9JJ37 291 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 HPDP32754 393 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 LACTBP83111 547 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 SULT2A1Q06520 285 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 MRPL28Q13084 256 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 TAF7Q15545 349 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 TRADDQ15628 312 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PDXDC1Q6P996 788 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 KCNH5Q8NCM2 988 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 C17orf50Q8WW18 174 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 TXLNGYQ9BZA5 131 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ABCF3Q9NUQ8 709 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 AATFQ9NY61 560 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHD9-218ENST00000566029 PRR12Q9ULL5 1215 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 EDC4Q6P2E9 1401 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 SOS2Q07890 1332 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 LGALS16A8MUM7 142 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 GTPBP6O43824 516 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 GLI1P08151 1106 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 IDO1P14902 403 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ASRGL1Q7L266 308 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 THEMISQ8N1K5 641 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 ANKS4BQ8N8V4 417 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 IFT81Q8WYA0 676 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CYP39A1Q9NYL5 469 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CIDEBQ9UHD4 219 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 WDR37Q9Y2I8 494 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 USP20Q9Y2K6 914 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 MRC1P22897 1456 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 GUCY2DQ02846 1103 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 GRIN1Q05586 938 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PPP1R21Q6ZMI0 780 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PHAXQ9H814 394 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 DIABLOQ9NR28 239 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PREX2Q70Z35 1606 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 LRRD1A4D1F6 860 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 A8MUI8 341 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 KCNJ18B7U540 433 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 NVLO15381 856 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 CCDC166P0CW27 439 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CALB2P22676 271 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 KCNJ12Q14500 433 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 FIGNQ5HY92 759 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZNF579Q8NAF0 562 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZBTB8BQ8NAP8 495 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 SCFD2Q8WU76 684 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 DYDC2Q96IM9 177 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZNF317Q96PQ6 595 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 ARPC5LQ9BPX5 153 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 TRIM7Q9C029 511 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 LRRC27Q9C0I9 530 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 SH2D4AQ9H788 454 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ARHGEF3Q9NR81 526 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 AIPL1Q9NZN9 384 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZBTB21Q9ULJ3 1066 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 IQANK1A0A1B0GTG1 560 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 MACROD2A1Z1Q3 448 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 LSM1O15116 133 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 HIP1RO75146 1068 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PMS1P54277 932 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 SEC14L1Q92503 715 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 OTULINQ96BN8 352 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PUS3Q9BZE2 481 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 KRT23Q9C075 422 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 TTYH3Q9C0H2 523 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 DHX36Q9H2U1 1008 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 EPB41L4BQ9H329 900 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 TRIM33Q9UPN9 1127 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 TBC1D30Q9Y2I9 924 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms